Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: DNA polymerase alpha/epsilon, subunit B

Term: IPR007185  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1684 SustainPine v2.0 842
AutoFact: DNA polymerase epsilon subunit B -like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Os05g0160800 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna polymerase epsilon subunit 2-like 0.0
C-terminus
sp_v2.0_unigene4239 SustainPine v2.0 2470
AutoFact: DEAD-box ATP-dependent RNA helicase 40 [Arabidopsis thaliana] sp|Q9SQV1.1|RH40_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 40 gb|AAF08584.1|AC011623_17 putative RNA helicase [Arabidopsis thaliana] gb|AEE74400.1| DEAD-box ATP-dependent RNA heli 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 14 0.0
C-terminus
sp_v2.0_unigene5711 SustainPine v2.0 1292
AutoFact: Alpha DNA polymerase, putative n=1 Tax=Ricinus communis RepID=B9RMM9_RICCO 0.0
FL-Next: tr=Alpha DNA polymerase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: dna polymerase alpha subunit b 0.0
N-terminus
sp_v2.0_unigene11891 SustainPine v2.0 851
AutoFact: DNA polymerase delta subunit 2 [Arabidopsis thaliana] sp|O48520.2|DPOD2_ARATH RecName: Full=DNA polymerase delta small subunit gb|AAM97084.1| putative DNA polymerase delta small subunit [Arabidopsis thaliana] gb|AAP49515.1| At2g42120 [Arabidopsis thaliana 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna polymerase delta subunit 2 0.0
N-terminus
sp_v2.0_unigene23423 SustainPine v2.0 1290
AutoFact: DEAD-box ATP-dependent RNA helicase 40 [Arabidopsis thaliana] sp|Q9SQV1.1|RH40_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 40 gb|AAF08584.1|AC011623_17 putative RNA helicase [Arabidopsis thaliana] gb|AEE74400.1| DEAD-box ATP-dependent RNA heli 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 14 0.0
Putative C-terminus
sp_v2.0_unigene26090 SustainPine v2.0 1033
AutoFact: DEAD-box ATP-dependent RNA helicase 37 n=2 Tax=Oryza sativa Japonica Group RepID=RH37_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 37-like 0.0
Internal
sp_v2.0_unigene27769 SustainPine v2.0 1539
AutoFact: DNA polymerase delta subunit 2 [Arabidopsis thaliana] sp|O48520.2|DPOD2_ARATH RecName: Full=DNA polymerase delta small subunit gb|AAM97084.1| putative DNA polymerase delta small subunit [Arabidopsis thaliana] gb|AAP49515.1| At2g42120 [Arabidopsis thaliana 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna polymerase delta small subunit 0.0
C-terminus
sp_v2.0_unigene31210 SustainPine v2.0 688
AutoFact: DNA polymerase delta subunit 2 [Arabidopsis thaliana] sp|O48520.2|DPOD2_ARATH RecName: Full=DNA polymerase delta small subunit gb|AAM97084.1| putative DNA polymerase delta small subunit [Arabidopsis thaliana] gb|AAP49515.1| At2g42120 [Arabidopsis thaliana 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna polymerase delta small subunit 0.0
C-terminus
sp_v2.0_unigene34825 SustainPine v2.0 240
AutoFact: DNA polymerase delta small subunit n=5 Tax=Poaceae RepID=DPOD2_ORYSJ 3.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna polymerase delta small subunit 1.87012e-22
Internal
sp_v2.0_unigene36847 SustainPine v2.0 668
AutoFact: DNA polymerase epsilon subunit B -like protein [Arabidopsis thaliana] 6.0e-29
FL-Next: tr=DNA polymerase epsilon subunit 2; Zea mays (Maize). 0.0
Blast2go: dna polymerase epsilon subunit 2-like 0.0
Internal
sp_v2.0_unigene42454 SustainPine v2.0 235
AutoFact: DNA polymerase alpha 2 [Arabidopsis thaliana] gb|AEE34673.1| DNA polymerase alpha 2 [Arabidopsis thaliana] 9.0e-10
FL-Next: tr=DNA polymerase alpha subunit B family protein, expressed; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna polymerase alpha subunit b 3.57499e-18
Internal
sp_v2.0_unigene62066 SustainPine v2.0 450
AutoFact: DNA polymerase delta subunit 2 [Arabidopsis thaliana] sp|O48520.2|DPOD2_ARATH RecName: Full=DNA polymerase delta small subunit gb|AAM97084.1| putative DNA polymerase delta small subunit [Arabidopsis thaliana] gb|AAP49515.1| At2g42120 [Arabidopsis thaliana 4.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene62363 SustainPine v2.0 871
AutoFact: Helicase, C-terminal [Medicago truncatula] 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 2.41298e-36
C-terminus
sp_v2.0_unigene67430 SustainPine v2.0 503
AutoFact: RecName: Full=ATP-dependent RNA helicase-like protein DB10 dbj|BAA03763.1| RNA helicase like protein DB10 [Nicotiana sylvestris] 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 3.32607e-39
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain