Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: ABC transporter, transmembrane domain

Term: IPR001140  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene19859 SustainPine v2.0 2756
AutoFact: putative ABC transporter [Hordeum vulgare subsp. vulgare] 0.0
FL-Next: sp=ABC transporter B family member 25; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: abc transporter family protein 0.0
Complete
sp_v2.0_unigene20507 SustainPine v2.0 423
AutoFact: ABC transporter B family member 20 n=6 Tax=Arabidopsis RepID=AB20B_ARATH 2.0e-39
FL-Next: sp=ABC transporter B family member 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter b family member 20-like 1.43031e-40
Internal
sp_v2.0_unigene23402 SustainPine v2.0 715
AutoFact: Putative multidrug resistance protein n=8 Tax=Poaceae RepID=MDR_ORYSJ 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 0.0
C-terminus
sp_v2.0_unigene24877 SustainPine v2.0 412
AutoFact: Multidrug/pheromone exporter protein n=1 Tax=Hevea brasiliensis RepID=F2YGT1_HEVBR 8.0e-36
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 1.61961e-35
Putative C-terminus
sp_v2.0_unigene25768 SustainPine v2.0 314
AutoFact: Transporter ATM1, mitochondrial, putative n=1 Tax=Ricinus communis RepID=B9T3V9_RICCO 7.00649e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter family of the mitochondria family 0.0
Internal
sp_v2.0_unigene26390 SustainPine v2.0 1273
AutoFact: ABC transporter, putative n=5 Tax=Oryza sativa RepID=Q53QH6_ORYSJ 0.0
FL-Next: sp=ABC transporter C family member 10; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter c family member 10-like 0.0
Internal
sp_v2.0_unigene27018 SustainPine v2.0 667
AutoFact: [V] COG1132 ABC-type multidrug transport system, ATPase and permease components 2.8026e-45
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 1-like 0.0
Internal
sp_v2.0_unigene27024 SustainPine v2.0 1566
AutoFact: ABC transporter B family member 15 n=3 Tax=Arabidopsis RepID=AB15B_ARATH 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 0.0
Internal
sp_v2.0_unigene28165 SustainPine v2.0 285
AutoFact: ATP-binding cassette transporter n=2 Tax=Selaginella moellendorffii RepID=D8RF00_SELML 6.0e-31
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: atp-binding cassette transporter 3.06391e-36
Internal
sp_v2.0_unigene28215 SustainPine v2.0 2126
AutoFact: Multidrug resistance associated protein 1 n=3 Tax=Andropogoneae RepID=Q6Y3I1_MAIZE 4.06377e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter c family member 8-like 0.0
Putative N-terminus
sp_v2.0_unigene28289 SustainPine v2.0 2386
AutoFact: RecName: Full=Putative multidrug resistance protein; AltName: Full=P-glycoprotein dbj|BAD16475.1| putative multidrug resistance p-glycoprotein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: multidrug pheromone mdr abc transporter family 0.0
C-terminus
sp_v2.0_unigene28952 SustainPine v2.0 878
AutoFact: ATNAP8, putative n=1 Tax=Ricinus communis RepID=B9R9H4_RICCO 0.0
FL-Next: Isoform 2 of ABC transporter B family member 28 OS=Arabidopsis thaliana GN=ABCB28 0.0
Blast2go: abc transporter b family member 28 0.0
Putative N-terminus
sp_v2.0_unigene29365 SustainPine v2.0 672
AutoFact: ATP-binding cassette transporter, subfamily B, member 18, group MDR/PGP protein PpABCB18 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RU14_PHYPA 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: atp-binding cassette transporter 0.0
Internal
sp_v2.0_unigene30592 SustainPine v2.0 935
AutoFact: putative ABC protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter b family member chloroplastic-like 0.0
C-terminus
sp_v2.0_unigene31349 SustainPine v2.0 898
AutoFact: RecName: Full=Putative multidrug resistance protein; AltName: Full=P-glycoprotein dbj|BAD16475.1| putative multidrug resistance p-glycoprotein [Oryza sativa Japonica Group] 3.0e-36
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: multidrug pheromone mdr abc transporter family 2.73071e-41
Internal
sp_v2.0_unigene31371 SustainPine v2.0 494
AutoFact: PREDICTED: similar to ABC transporter family protein n=1 Tax=Vitis vinifera RepID=UPI0001985B98 5.99994e-41
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 0.0
C-terminus
sp_v2.0_unigene31953 SustainPine v2.0 278
AutoFact: ABC transporter-like protein (Fragment) n=2 Tax=Picea sitchensis RepID=E0ZDW2_PICSI 2.0e-25
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter-like protein 2.30196e-34
Putative C-terminus
sp_v2.0_unigene32347 SustainPine v2.0 754
AutoFact: RecName: Full=Putative multidrug resistance protein; AltName: Full=P-glycoprotein dbj|BAD16475.1| putative multidrug resistance p-glycoprotein [Oryza sativa Japonica Group] 9.0e-32
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: multidrug resistance p-glycoprotein 9.53063e-37
Internal
sp_v2.0_unigene32623 SustainPine v2.0 620
AutoFact: Multidrug resistance protein ABC transporter family n=1 Tax=Populus trichocarpa RepID=B9GJX7_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multidrug resistance protein abc transporter family 0.0
Putative Complete
sp_v2.0_unigene33240 SustainPine v2.0 698
AutoFact: Multidrug resistance-associated protein 1 n=1 Tax=Phaseolus vulgaris RepID=E3Q0A7_PHAVU 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter c family member 5-like 2.66787e-28
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain