Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: ABC transporter, transmembrane domain

Term: IPR001140  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene8398 SustainPine v2.0 2961
AutoFact: ABC transporter C family member 2 [Arabidopsis thaliana] ref|NP_001189675.1| ABC transporter C family member 2 [Arabidopsis thaliana] sp|Q42093.2|AB2C_ARATH RecName: Full=ABC transporter C family member 2; Short=ABC transporter ABCC.2; Short=AtABCC2; AltN 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter c family member 2 0.0
C-terminus
sp_v2.0_unigene9821 SustainPine v2.0 396
AutoFact: multidrug resistance protein associated1 [Zea mays] gb|AAO72315.1| multidrug resistance associated protein 1 [Zea mays] gb|AAO72316.1| multidrug resistance associated protein 1 [Zea mays] 5.0e-12
FL-Next: Isoform 2 of ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 0.0
Blast2go: abc transporter c family member 8-like 1.82258e-14
Internal
sp_v2.0_unigene10286 SustainPine v2.0 672
AutoFact: MDR-like ABC transporter n=1 Tax=Ginkgo biloba RepID=E6Y0T2_GINBI 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: mdr-like abc transporter 0.0
Internal
sp_v2.0_unigene10393 SustainPine v2.0 795
AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=2 Tax=Malpighiales RepID=B9IFR5_POPTR 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 1-like 0.0
Putative C-terminus
sp_v2.0_unigene10909 SustainPine v2.0 1642
AutoFact: MDR-like ABC transporter n=1 Tax=Taxus cuspidata RepID=E6Y0T0_TAXCU 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: multidrug resistance protein 0.0
C-terminus
sp_v2.0_unigene10956 SustainPine v2.0 851
AutoFact: Putative multidrug resistance protein n=8 Tax=Poaceae RepID=MDR_ORYSJ 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 0.0
C-terminus
sp_v2.0_unigene11047 SustainPine v2.0 385
AutoFact: Transporter ATM1, mitochondrial, putative n=1 Tax=Ricinus communis RepID=B9T3V9_RICCO 1.0e-32
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member mitochondrial-like 4.25317e-39
C-terminus
sp_v2.0_unigene11372 SustainPine v2.0 685
AutoFact: MDR-like ABC transporter n=1 Tax=Ginkgo biloba RepID=E6Y0T2_GINBI 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: mdr-like abc transporter 0.0
Internal
sp_v2.0_unigene12252 SustainPine v2.0 1390
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SJG4_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter family of the mitochondria family 0.0
Putative N-terminus
sp_v2.0_unigene13478 SustainPine v2.0 593
AutoFact: MDR-like ABC transporter n=1 Tax=Taxus cuspidata RepID=E6Y0T0_TAXCU 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: multidrug pheromone mdr abc transporter family 0.0
Putative C-terminus
sp_v2.0_unigene13604 SustainPine v2.0 327
AutoFact: Multidrug resistance protein ABC transporter family n=1 Tax=Populus trichocarpa RepID=B9IB53_POPTR 4.0e-35
FL-Next: sp=Putative ABC transporter C family member 15; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter c family member 9-like 7.26573e-41
Internal
sp_v2.0_unigene14563 SustainPine v2.0 352
AutoFact: ATP-binding cassette transporter, subfamily B, member 6, group TAP protein PpABCB6 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TRT8_PHYPA 2.0e-20
FL-Next: sp=ABC transporter B family member 26, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter b family member chloroplastic-like 9.04364e-24
Internal
sp_v2.0_unigene14688 SustainPine v2.0 730
AutoFact: ABC transporter-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: multidrug resistance protein abc transporter family 0.0
Internal
sp_v2.0_unigene14705 SustainPine v2.0 268
AutoFact: ATP-binding cassette transporter, subfamily B, member 11, group MDR/PGP protein PpABCB11 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U052_PHYPA 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette subfamily member group mdr pgp protein 11 2.82737e-20
Putative Complete
sp_v2.0_unigene14933 SustainPine v2.0 804
AutoFact: MDR-like ABC transporter n=1 Tax=Taxus cuspidata RepID=E6Y0T0_TAXCU 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: multidrug pheromone mdr abc transporter family 0.0
Internal
sp_v2.0_unigene16029 SustainPine v2.0 789
AutoFact: multidrug resistance-associated protein 14 [Arabidopsis thaliana] gb|AEE79882.1| multidrug resistance-associated protein 14 [Arabidopsis thaliana] 4.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter c family member 10-like 2.45215e-30
C-terminus
sp_v2.0_unigene18247 SustainPine v2.0 954
AutoFact: Putative multidrug resistance protein n=8 Tax=Poaceae RepID=MDR_ORYSJ 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 0.0
Internal
sp_v2.0_unigene19247 SustainPine v2.0 675
AutoFact: Multidrug resistance protein ABC transporter family n=1 Tax=Populus trichocarpa RepID=B9GRC2_POPTR 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter c family member 5-like 0.0
Internal
sp_v2.0_unigene19308 SustainPine v2.0 441
AutoFact: Multidrug resistance-associated protein 2, 6 (Mrp2, 6), abc-transoprter, putative n=1 Tax=Ricinus communis RepID=B9SAP4_RICCO 3.00004e-41
FL-Next: sp=ABC transporter C family member 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: multidrug resistance protein abc transporter family 0.0
Internal
sp_v2.0_unigene19492 SustainPine v2.0 567
AutoFact: Multidrug resistance protein ABC transporter family n=1 Tax=Populus trichocarpa RepID=B9IB53_POPTR 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: like cupin-like protein 0.0
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain