Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Vps4 oligomerisation, C-terminal

Term: IPR015415  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1716 SustainPine v2.0 1838
AutoFact: Vacuolar protein sorting factor 4B-like n=4 Tax=Poaceae RepID=Q5QMP6_ORYSJ 0.0
FL-Next: tr=Katanin p60 ATPase-containing subunit, putative; Ricinus communis (Castor bean). 0.0
Blast2go: katanin p60 atpase-containing subunit a-like 2-like 0.0
Complete
sp_v2.0_unigene2465 SustainPine v2.0 3333
AutoFact: P-loop containing nucleoside triphosphate hydrolase-like protein n=6 Tax=Arabidopsis RepID=F4I5A3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: p-loop containing nucleoside triphosphate hydrolase-like protein 0.0
Complete
sp_v2.0_unigene2882 SustainPine v2.0 2823
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RIQ4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: p-loop containing nucleoside triphosphate hydrolase-like protein 0.0
Complete
sp_v2.0_unigene3560 SustainPine v2.0 2385
AutoFact: katanin [Gossypium hirsutum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: katanin p60 atpase-containing subunit 0.0
Complete
sp_v2.0_unigene3723 SustainPine v2.0 2895
AutoFact: kinesin family member 22 [Arabidopsis thaliana] gb|AAX12877.1| At5g02370 [Arabidopsis thaliana] gb|AED90464.1| kinesin family member 22 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kinesin-like protein kif22-like 0.0
Complete
sp_v2.0_unigene7583 SustainPine v2.0 2116
AutoFact: Vacuolar protein sorting-associated protein VPS4, putative n=3 Tax=Spermatophyta RepID=B9SCR4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vacuolar sorting protein 4b 0.0
Complete
sp_v2.0_unigene14485 SustainPine v2.0 820
AutoFact: [O] COG0464 ATPases of the AAA+ class 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aaa-type atpase-like protein 0.0
N-terminus
sp_v2.0_unigene18697 SustainPine v2.0 667
AutoFact: P-loop containing nucleoside triphosphate hydrolase-like protein n=5 Tax=Arabidopsis RepID=F4JEX5_ARATH 3.0e-08
FL-Next: tr=P-loop containing nucleoside triphosphate hydrolase-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: fidgetin-like protein 1-like 3.12584e-08
C-terminus
sp_v2.0_unigene20198 SustainPine v2.0 1173
AutoFact: peroxisome 1 [Arabidopsis thaliana] sp|Q9FNP1.2|PEX1_ARATH RecName: Full=Peroxisome biogenesis protein 1; AltName: Full=Peroxin-1; Short=AtPEX1 gb|AED91307.1| peroxisome 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peroxisome biogenesis protein 1-like 0.0
C-terminus
sp_v2.0_unigene20780 SustainPine v2.0 1297
AutoFact: [O] COG0464 ATPases of the AAA+ class 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene22952 SustainPine v2.0 2200
AutoFact: Vacuolar protein sorting-associated protein VPS4, putative n=3 Tax=Spermatophyta RepID=B9SCR4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vacuolar sorting protein 4b 0.0
Complete
sp_v2.0_unigene26070 SustainPine v2.0 680
AutoFact: Protein MSP1, putative n=1 Tax=Ricinus communis RepID=B9T1I4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: p-loop containing nucleoside triphosphate hydrolase domain-containing protein 0.0
Internal
sp_v2.0_unigene27065 SustainPine v2.0 2473
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] dbj|BAF01763.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82177.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 0.0
Complete
sp_v2.0_unigene27310 SustainPine v2.0 956
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aaa-type atpase-like protein 0.0
C-terminus
sp_v2.0_unigene28258 SustainPine v2.0 4002
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] dbj|BAF01763.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82177.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v2.0_unigene33282 SustainPine v2.0 871
AutoFact: transitional endoplasmic reticulum ATPase-like [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: p-loop containing ntpase domain-containing protein 0.0
Putative C-terminus
sp_v2.0_unigene35069 SustainPine v2.0 560
AutoFact: [O] COG0464 ATPases of the AAA+ class 8.00001e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aaa-type atpase-like protein 0.0
Internal
sp_v2.0_unigene36598 SustainPine v2.0 1387
AutoFact: [O] COG0464 ATPases of the AAA+ class 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fidgetin-like protein 1-like 0.0
N-terminus
sp_v2.0_unigene39039 SustainPine v2.0 521
AutoFact: peroxin 6 [Helianthus annuus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peroxin 6 0.0
Internal
sp_v2.0_unigene39704 SustainPine v2.0 493
AutoFact: WS02788.CR_H04 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02788_H04 3', mRNA sequence. 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: fidgetin-like protein 1-like 5.80721e-26
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain