Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: CDC48, N-terminal subdomain

Term: IPR003338  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene2465 SustainPine v2.0 3333
AutoFact: P-loop containing nucleoside triphosphate hydrolase-like protein n=6 Tax=Arabidopsis RepID=F4I5A3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: p-loop containing nucleoside triphosphate hydrolase-like protein 0.0
Complete
sp_v2.0_unigene2882 SustainPine v2.0 2823
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RIQ4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: p-loop containing nucleoside triphosphate hydrolase-like protein 0.0
Complete
sp_v2.0_unigene4741 SustainPine v2.0 1191
AutoFact: calmodulin-binding protein [Arabidopsis thaliana] gb|AAF28348.1| calmodulin-binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aaa family atpase cdc48 subfamily 0.0
C-terminus
sp_v2.0_unigene5198 SustainPine v2.0 2860
AutoFact: N-ethylmaleimide sensitive fusion protein [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vesicle-fusing atpase-like 0.0
Complete
sp_v2.0_unigene7864 SustainPine v2.0 3015
AutoFact: [O] COG0464 ATPases of the AAA+ class 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cell division cycle protein 48 homolog 0.0
Complete
sp_v2.0_unigene17156 SustainPine v2.0 2367
AutoFact: 26S protease regulatory subunit 7 homolog A n=26 Tax=Embryophyta RepID=PRS7A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: regulatory particle triple-a 1a 0.0
Complete
sp_v2.0_unigene17922 SustainPine v2.0 3125
AutoFact: [O] COG0464 ATPases of the AAA+ class 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cell division cycle protein 48 homolog 0.0
Complete
sp_v2.0_unigene19529 SustainPine v2.0 2585
AutoFact: RecName: Full=Cell division cycle protein 48 homolog; AltName: Full=Valosin-containing protein homolog; Short=VCP gb|AAA80587.1| valosin-containing protein [Glycine max] gb|ABC87759.1| plamsma membrane-associated AAA-ATPase [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cell division cycle protein 48 homolog 0.0
Complete
sp_v2.0_unigene20198 SustainPine v2.0 1173
AutoFact: peroxisome 1 [Arabidopsis thaliana] sp|Q9FNP1.2|PEX1_ARATH RecName: Full=Peroxisome biogenesis protein 1; AltName: Full=Peroxin-1; Short=AtPEX1 gb|AED91307.1| peroxisome 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peroxisome biogenesis protein 1-like 0.0
C-terminus
sp_v2.0_unigene20780 SustainPine v2.0 1297
AutoFact: [O] COG0464 ATPases of the AAA+ class 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene27065 SustainPine v2.0 2473
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] dbj|BAF01763.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82177.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 0.0
Complete
sp_v2.0_unigene28258 SustainPine v2.0 4002
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] dbj|BAF01763.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82177.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v2.0_unigene31473 SustainPine v2.0 2866
AutoFact: [O] COG0464 ATPases of the AAA+ class 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cell division cycle protein 48 homolog 0.0
Complete
sp_v2.0_unigene35730 SustainPine v2.0 693
AutoFact: Vesicular-fusion protein nsf, putative n=1 Tax=Ricinus communis RepID=B9RZA0_RICCO 0.0
FL-Next: sp=Vesicle-fusing ATPase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: vesicle-fusing atpase-like 0.0
N-terminus
sp_v2.0_unigene39039 SustainPine v2.0 521
AutoFact: peroxin 6 [Helianthus annuus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peroxin 6 0.0
Internal
sp_v2.0_unigene43386 SustainPine v2.0 601
AutoFact: cell division cycle 48C protein [Arabidopsis thaliana] sp|Q9SS94.2|CD48C_ARATH RecName: Full=Cell division control protein 48 homolog C; Short=AtCDC48c; AltName: Full=Protein EMBRYO DEFECTIVE 1354 gb|AAM97108.1| putative cell division control protein [Ara 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cell division control protein 0.0
Internal
sp_v2.0_unigene55037 SustainPine v2.0 375
AutoFact: putative cell division control protein [Arabidopsis thaliana] 3.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.34365e-40
Internal
sp_v2.0_unigene59519 SustainPine v2.0 361
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9T479_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atpase family aaa domain-containing protein 2b-like 0.0
Internal
sp_v2.0_unigene65514 SustainPine v2.0 349
AutoFact: RecName: Full=Cell division cycle protein 48 homolog; AltName: Full=Valosin-containing protein homolog; Short=VCP gb|AAA80587.1| valosin-containing protein [Glycine max] gb|ABC87759.1| plamsma membrane-associated AAA-ATPase [Glycine max] 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cell division cycle protein 48 homolog 9.82133e-34
Internal
sp_v2.0_unigene66389 SustainPine v2.0 449
AutoFact: transitional endoplasmic reticulum ATPase - Arabidopsis thaliana emb|CAB83290.1| transitional endoplasmic reticulum ATPase [Arabidopsis thaliana] 5.0e-24
FL-Next: sp=Cell division control protein 48 homolog E; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cell division cycle protein 9.01025e-26
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain