Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: RNA helicase, DEAD-box type, Q motif

Term: IPR014014  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene85621 SustainPine v2.0 374
• AutoFact: ATP dependent RNA helicase dpb5 [Oryza sativa Indica Group] 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 38-like 7.35503e-38
Putative C-terminus
sp_v2.0_unigene85856 SustainPine v2.0 515
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7SJI2_VITVI 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
sp_v2.0_unigene86502 SustainPine v2.0 311
• AutoFact: putative ethylene-responsive RNA helicase [Oryza sativa Japonica Group] 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead box atp-dependent rna 2.58343e-26
Internal
sp_v2.0_unigene91154 SustainPine v2.0 465
• AutoFact: leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily protein [Arabidopsis thaliana] dbj|BAB11189.1| unnamed protein product [Arabidopsis thaliana] gb|AAL06927.1| AT5g23340/MKD15_20 [Arabidopsis thaliana] gb|AAM91352.1| At5g23340/MKD15_2 7.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box lrr-repeat protein 2-like 1.82169e-44
Internal
sp_v2.0_unigene91988 SustainPine v2.0 3334
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SYU7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 37-like 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain