Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: RNA helicase, DEAD-box type, Q motif

Term: IPR014014  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene63588 SustainPine v2.0 757
• AutoFact: Ebp2 domain containing protein 1.0e-05
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 28; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: atp-dependent rna helicase 4.23086e-11
C-terminus
sp_v2.0_unigene64571 SustainPine v2.0 570
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 20 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 1.57829e-28
Putative C-terminus
sp_v2.0_unigene67430 SustainPine v2.0 503
• AutoFact: RecName: Full=ATP-dependent RNA helicase-like protein DB10 dbj|BAA03763.1| RNA helicase like protein DB10 [Nicotiana sylvestris] 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 3.32607e-39
Putative C-terminus
sp_v2.0_unigene67528 SustainPine v2.0 604
• AutoFact: ethylene-responsive RNA helicase [Solanum lycopersicum] 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead box rna helicase 0.0
Internal
sp_v2.0_unigene68381 SustainPine v2.0 438
• AutoFact: eIF-4A n=4 Tax=Poaceae RepID=B5AKW1_PENAM 8.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 9.41915e-34
N-terminus
sp_v2.0_unigene74363 SustainPine v2.0 345
• AutoFact: Helicase, C-terminal; Zinc finger, CCHC-type; GUCT n=1 Tax=Medicago truncatula RepID=Q2HUZ8_MEDTR 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead deah box helicase family expressed 0.0
Internal
sp_v2.0_unigene77018 SustainPine v2.0 720
• AutoFact: dead-box helicase [Platanus x acerifolia] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box protein abstrakt 0.0
Internal
sp_v2.0_unigene78116 SustainPine v2.0 370
• AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 7.00005e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
sp_v2.0_unigene79136 SustainPine v2.0 461
• AutoFact: Eukaryotic initiation factor 4A-3 n=8 Tax=Embryophyta RepID=IF4A3_NICPL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: eukaryotic initiation factor 0.0
C-terminus
sp_v2.0_unigene79138 SustainPine v2.0 489
• AutoFact: ethylene-responsive RNA helicase [Solanum lycopersicum] 8.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 8.26766e-44
Putative C-terminus
sp_v2.0_unigene80035 SustainPine v2.0 565
• AutoFact: Eukaryotic translation initiation factor (Fragment) n=2 Tax=Viridiplantae RepID=Q1WLT9_CHLIN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene81547 SustainPine v2.0 249
• AutoFact: Eukaryotic initiation factor 4A-like protein n=2 Tax=Chlamydomonadales RepID=A8IP17_CHLRE 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: translational initiation factor 4a-1 2.69929e-25
C-terminus
sp_v2.0_unigene82272 SustainPine v2.0 633
• AutoFact: eukaryotic initiation factor 4A [Pennisetum glaucum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: eukaryotic initiation factor 4a 0.0
Putative N-terminus
sp_v2.0_unigene82698 SustainPine v2.0 408
• AutoFact: Eukaryotic translation initiation factor (Fragment) n=2 Tax=Viridiplantae RepID=Q1WLT9_CHLIN 6.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 3.48218e-38
C-terminus
sp_v2.0_unigene82740 SustainPine v2.0 843
• AutoFact: eukaryotic initiation factor 4A [Oryza sativa Japonica Group] dbj|BAB21260.1| eukaryotic initiation factor 4A [Oryza sativa] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene82771 SustainPine v2.0 481
• AutoFact: RecName: Full=Eukaryotic initiation factor 4A; Short=eIF-4A; AltName: Full=ATP-dependent RNA helicase eIF4A 5.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.35117e-27
N-terminus
sp_v2.0_unigene82802 SustainPine v2.0 441
• AutoFact: RecName: Full=Eukaryotic initiation factor 4A; Short=eIF-4A; AltName: Full=ATP-dependent RNA helicase eIF4A 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 3.1911e-28
N-terminus
sp_v2.0_unigene82825 SustainPine v2.0 518
• AutoFact: Eukaryotic translation initiation factor (Fragment) n=2 Tax=Viridiplantae RepID=Q1WLT9_CHLIN 3.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.01773e-16
C-terminus
sp_v2.0_unigene83093 SustainPine v2.0 720
• AutoFact: Eukaryotic translation initiation factor (Fragment) n=2 Tax=Viridiplantae RepID=Q1WLT9_CHLIN 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.48664e-41
Putative Complete
sp_v2.0_unigene83363 SustainPine v2.0 388
• AutoFact: RVT_2 domain containing protein 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: uncharacterized protein loc100795634 9.50741e-34
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain