Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: RNA helicase, DEAD-box type, Q motif

Term: IPR014014  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene37784 SustainPine v2.0 2162
• AutoFact: DEAD-box ATP-dependent RNA helicase 37 n=2 Tax=Oryza sativa Japonica Group RepID=RH37_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 37-like 0.0
C-terminus
sp_v2.0_unigene38393 SustainPine v2.0 433
• AutoFact: DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana] sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24 gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana] gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidop 0.0
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 24; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dead-box atp-dependent rna helicase 24-like 0.0
Internal
sp_v2.0_unigene40751 SustainPine v2.0 301
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 22 7.0e-31
• FL-Next: Isoform 2 of DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa subsp. japonica GN=Os09g0383400 0.0
• Blast2go: dead-box atp-dependent rna helicase 22 1.08495e-37
Internal
sp_v2.0_unigene42650 SustainPine v2.0 372
• AutoFact: DEAD-box ATP-dependent RNA helicase 41 n=4 Tax=Oryza sativa RepID=RH41_ORYSJ 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 41 4.2039e-45
Internal
sp_v2.0_unigene48270 SustainPine v2.0 375
• AutoFact: DEAD-box ATP-dependent RNA helicase 41 [Arabidopsis thaliana] ref|NP_001030621.1| DEAD-box ATP-dependent RNA helicase 41 [Arabidopsis thaliana] sp|Q3EBD3.1|RH41_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 41 gb|AEE73756.1| DEAD-box ATP-depende 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 41 0.0
Internal
sp_v2.0_unigene48791 SustainPine v2.0 284
• AutoFact: DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana] sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24 gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana] gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidop 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 24-like 1.39009e-33
Putative C-terminus
sp_v2.0_unigene52409 SustainPine v2.0 290
• AutoFact: DEAD-box ATP-dependent RNA helicase 18 [Arabidopsis thaliana] sp|Q9FLB0.1|RH18_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 18 dbj|BAB09988.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AED90875.1| DEAD-box ATP-dependent 9.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 18-like 6.30339e-35
Internal
sp_v2.0_unigene55223 SustainPine v2.0 184
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S714_RICCO 2.0e-11
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 21; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: unnamed protein product [Vitis vinifera] 5.15308e-09
Internal
sp_v2.0_unigene58338 SustainPine v2.0 237
• AutoFact: DEAD-box ATP-dependent RNA helicase 22 n=3 Tax=Oryza sativa RepID=RH22_ORYSJ 1.0e-18
• FL-Next: Isoform 2 of DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa subsp. japonica GN=Os09g0383400 0.0
• Blast2go: dead-box atp-dependent rna helicase 22-like 2.943e-22
Internal
sp_v2.0_unigene58742 SustainPine v2.0 226
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S033_RICCO 3.0e-22
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 50; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: dead-box atp-dependent rna helicase 50-like 1.50864e-26
Internal
sp_v2.0_unigene61174 SustainPine v2.0 1291
• AutoFact: DEAD BOX RNA helicase RH15 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 56 0.0
C-terminus
sp_v2.0_unigene61541 SustainPine v2.0 486
• AutoFact: GRP multi-domain protein 2.0e-13
unknown
sp_v2.0_unigene61864 SustainPine v2.0 1128
• AutoFact: DEAD-box ATP-dependent RNA helicase 31 n=3 Tax=Arabidopsis RepID=RH31_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna helicase 0.0
C-terminus
sp_v2.0_unigene62167 SustainPine v2.0 500
• AutoFact: putative WD-40 repeat protein [Arabidopsis thaliana] gb|AAM14874.1| putative WD-40 repeat protein [Arabidopsis thaliana] 6.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: wd-40 repeat protein 0.0
Internal
sp_v2.0_unigene62363 SustainPine v2.0 871
• AutoFact: Helicase, C-terminal [Medicago truncatula] 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 2.41298e-36
C-terminus
sp_v2.0_unigene62431 SustainPine v2.0 561
• AutoFact: FAP multi-domain protein 2.0e-17
Coding
sp_v2.0_unigene62620 SustainPine v2.0 296
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 38-like 2.55614e-17
C-terminus
sp_v2.0_unigene62643 SustainPine v2.0 530
• AutoFact: DEAD-box ATP-dependent RNA helicase 2 n=6 Tax=BEP clade RepID=RH2_ORYSJ 7.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene62945 SustainPine v2.0 470
• AutoFact: Probable 26S proteasome non-ATPase regulatory subunit 7 n=15 Tax=Magnoliophyta RepID=PSD7_ARATH 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 26s proteasome regulatory particle non-atpase subunit 3.98109e-42
Putative N-terminus
sp_v2.0_unigene63307 SustainPine v2.0 501
• AutoFact: putative DEAD/DEAH box helicase [Narcissus pseudonarcissus] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: eukaryotic initiation factor 4a-10-like 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain