Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Actin-like

Term: IPR004000  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene80305 SustainPine v2.0 639
AutoFact: Actin-11 n=180 Tax=Spermatophyta RepID=ACT11_ARATH 0.0
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Blast2go: actin 0.0
Internal
sp_v2.0_unigene80315 SustainPine v2.0 529
AutoFact: Actin (Fragment) n=4 Tax=Spermatophyta RepID=ACT_PINCO 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: actin 0.0
Complete
sp_v2.0_unigene80361 SustainPine v2.0 383
AutoFact: Polyubiquitin 9 n=1 Tax=Arabidopsis thaliana RepID=UBQ9_ARATH 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyubiquitin 9 8.75533e-30
C-terminus
sp_v2.0_unigene81298 SustainPine v2.0 518
AutoFact: Actin, putative n=2 Tax=core eudicotyledons RepID=B9SXZ5_RICCO 0.0
FL-Next: tr=Actin 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: actin 0.0
N-terminus
sp_v2.0_unigene81426 SustainPine v2.0 321
AutoFact: Actin (Fragment) n=4 Tax=Spermatophyta RepID=ACT_PINCO 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin 0.0
Putative C-terminus
sp_v2.0_unigene82249 SustainPine v2.0 609
AutoFact: PREDICTED: similar to Actin, alpha skeletal muscle (Alpha-actin 1) isoform 4 [Canis familiaris] 0.0
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Blast2go: actin 0.0
Putative C-terminus
sp_v2.0_unigene82354 SustainPine v2.0 730
AutoFact: Actin, gamma, cytoplasmic 1 n=12 Tax=Fungi/Metazoa group RepID=B1ATY1_MOUSE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin 0.0
Putative Complete
sp_v2.0_unigene82362 SustainPine v2.0 442
AutoFact: Actin-like protein (Fragment) n=6 Tax=Magnoliophyta RepID=E5L4N8_ONCHC 0.0
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Blast2go: actin 0.0
Internal
sp_v2.0_unigene82373 SustainPine v2.0 430
AutoFact: Actin-11 n=180 Tax=Spermatophyta RepID=ACT11_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin 0.0
Putative C-terminus
sp_v2.0_unigene82408 SustainPine v2.0 546
AutoFact: Strong similarity to the sucrose-phosphate synthase from Craterostigma plantagineum gb|Y11795 [Arabidopsis thaliana] 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin 0.0
Putative C-terminus
sp_v2.0_unigene82431 SustainPine v2.0 505
AutoFact: Actin-like protein (Fragment) n=6 Tax=Magnoliophyta RepID=E5L4N8_ONCHC 7.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin 1.44198e-34
N-terminus
sp_v2.0_unigene83815 SustainPine v2.0 492
AutoFact: [O] COG5272 Ubiquitin 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyubiqutin 1 5.76062e-29
Putative Complete
sp_v2.0_unigene83821 SustainPine v2.0 196
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 2.0e-22
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Putative C-terminus
sp_v2.0_unigene83926 SustainPine v2.0 221
AutoFact: Ubiquitin family protein n=1 Tax=Trichinella spiralis RepID=E5RYS0_TRISP 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyubiquitine protein 2.41135e-11
Internal
sp_v2.0_unigene84075 SustainPine v2.0 383
AutoFact: Actin, putative n=2 Tax=core eudicotyledons RepID=B9SXZ5_RICCO 3.0e-37
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Blast2go: actin 1.06855e-37
N-terminus
sp_v2.0_unigene85283 SustainPine v2.0 228
AutoFact: Actin 5 (Fragment) n=1 Tax=Cycas revoluta RepID=O23776_CYCRE 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-actin 1.4013e-45
Internal
sp_v2.0_unigene85560 SustainPine v2.0 350
AutoFact: Polyubiquitin (Fragment) n=2 Tax=Ascaris suum RepID=F1LEJ6_ASCSU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyubiquitin containing 7 ubiquitin monomers 0.0
N-terminus
sp_v2.0_unigene85631 SustainPine v2.0 318
AutoFact: Actin (Fragment) n=2 Tax=core eudicotyledons RepID=E3UU95_9ROSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin 0.0
N-terminus
sp_v2.0_unigene86063 SustainPine v2.0 483
AutoFact: Actin-related protein 2 n=7 Tax=rosids RepID=ARP2_ARATH 4.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin related protein 2 1.37327e-43
Putative C-terminus
sp_v2.0_unigene91709 SustainPine v2.0 1202
AutoFact: actin-related protein 7 [Arabidopsis thaliana] sp|Q8L4Y5.1|ARP7_ARATH RecName: Full=Actin-related protein 7 gb|AAM53247.1|AF507915_1 actin-related protein 7 [Arabidopsis thaliana] gb|AAM20512.1| actin -like protein [Arabidopsis thaliana] tpg|DAA00028.1| T 0.0
FL-Next: sp=Actin-related protein 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: actin related protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain