Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: F-box associated interaction domain

Term: IPR017451  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene77744 SustainPine v2.0 308
AutoFact: Unassigned protein
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Blast2go: wd repeat-containing 1.21632e-29
Internal
sp_v2.0_unigene78904 SustainPine v2.0 508
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: hypothetical protein VITISV_022356 [Vitis vinifera] 0.0
Internal
sp_v2.0_unigene79196 SustainPine v2.0 498
AutoFact: Peroxiredoxin n=4 Tax=Papilionoideae RepID=B3GV28_PEA 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: type ii peroxiredoxin 0.0
N-terminus
sp_v2.0_unigene79911 SustainPine v2.0 631
AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: polx_tobac ame: full=retrovirus-related pol polyprotein from transposon tnt 1-94 includes: ame: full=protease includes: ame: full=reverse transcriptase includes: ame: full=endonuclease 0.0
Internal
sp_v2.0_unigene80840 SustainPine v2.0 493
AutoFact: WD-40 repeat protein-like n=7 Tax=Poaceae RepID=Q7EYE2_ORYSJ 8.0e-24
FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 9.61252e-27
Putative C-terminus
sp_v2.0_unigene80963 SustainPine v2.0 373
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene81481 SustainPine v2.0 1258
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 0.0
FL-Next: tr=Calreticulin; Pinus taeda (Loblolly pine). 0.0
Blast2go: calreticulin precursor 0.0
N-terminus
sp_v2.0_unigene82167 SustainPine v2.0 395
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal
sp_v2.0_unigene82182 SustainPine v2.0 1320
AutoFact: WD-40 repeat protein-like n=7 Tax=Poaceae RepID=Q7EYE2_ORYSJ 1.0e-27
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Blast2go: topless-related protein 4-like 2.80669e-29
Internal
sp_v2.0_unigene82308 SustainPine v2.0 936
AutoFact: WD-repeat protein, putative 3.0e-35
FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 4.60082e-36
Internal
sp_v2.0_unigene82349 SustainPine v2.0 586
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein topless 7.00649e-44
Internal
sp_v2.0_unigene82367 SustainPine v2.0 477
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 1.00893e-43
Internal
sp_v2.0_unigene82369 SustainPine v2.0 530
AutoFact: WD-40 repeat protein-like n=7 Tax=Poaceae RepID=Q7EYE2_ORYSJ 2.0e-26
FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ramosa 1 enhancer locus 2 1.38002e-28
Internal
sp_v2.0_unigene82444 SustainPine v2.0 656
AutoFact: Topless-related protein 1 [Arabidopsis thaliana] sp|Q0WV90.3|TPR1_ARATH RecName: Full=Topless-related protein 1; AltName: Full=Protein MODIFIER OF SNC1 10 gb|AEE36412.1| Topless-related protein 1 [Arabidopsis thaliana] 1.4013e-45
FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein topless 0.0
Internal
sp_v2.0_unigene82490 SustainPine v2.0 528
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ramosa 1 enhancer locus 2 4.57204e-30
Internal
sp_v2.0_unigene82530 SustainPine v2.0 885
AutoFact: Topless-related protein 1 [Arabidopsis thaliana] sp|Q0WV90.3|TPR1_ARATH RecName: Full=Topless-related protein 1; AltName: Full=Protein MODIFIER OF SNC1 10 gb|AEE36412.1| Topless-related protein 1 [Arabidopsis thaliana] 0.0
FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein topless 0.0
Internal
sp_v2.0_unigene82531 SustainPine v2.0 673
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene82546 SustainPine v2.0 482
AutoFact: Unassigned protein
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene82547 SustainPine v2.0 575
AutoFact: WD-40 repeat protein-like n=7 Tax=Poaceae RepID=Q7EYE2_ORYSJ 0.0
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene82713 SustainPine v2.0 1126
AutoFact: DNA-binding protein MNB1B, putative n=1 Tax=Ricinus communis RepID=B9SQ35_RICCO 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group b2 protein 8.71655e-36
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain