|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
sp_v2.0_unigene59509
|
SustainPine v2.0
|
790
|
|
• AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrovirus-related pol polyprotein from transposon tnt 1-94
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene59563
|
SustainPine v2.0
|
598
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: hypothetical protein VITISV_042009 [Vitis vinifera]
|
0.0
|
|
Putative C-terminus
|
|
sp_v2.0_unigene60008
|
SustainPine v2.0
|
546
|
|
• AutoFact: rve domain containing protein
|
1.0e-12
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
1.98564e-42
|
|
Internal
|
|
sp_v2.0_unigene60052
|
SustainPine v2.0
|
383
|
|
• AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC
|
2.0e-35
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: polx_tobac ame: full=retrovirus-related pol polyprotein from transposon tnt 1-94 includes: ame: full=protease includes: ame: full=reverse transcriptase includes: ame: full=endonuclease
|
2.04982e-41
|
|
Internal
|
|
sp_v2.0_unigene60061
|
SustainPine v2.0
|
472
|
|
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL
|
0.0
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene62520
|
SustainPine v2.0
|
369
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco).
|
0.0
|
|
• Blast2go: hypothetical protein VITISV_043997 [Vitis vinifera]
|
5.34462e-26
|
|
Internal
|
|
sp_v2.0_unigene62922
|
SustainPine v2.0
|
474
|
|
• AutoFact: WASH complex subunit strumpellin [Danio rerio] sp|Q7ZVM1.1|STRUM_DANRE RecName: Full=WASH complex subunit strumpellin gb|AAH45490.1| Zgc:55908 [Danio rerio]
|
8.0e-22
|
|
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).
|
0.0
|
|
• Blast2go: wash complex subunit strumpellin-like
|
8.6985e-35
|
|
Internal
|
|
sp_v2.0_unigene63886
|
SustainPine v2.0
|
725
|
|
• AutoFact: NXRV092_H05_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV092_H05 5' similar to Arabidopsis thaliana sequence At2g13930 putative retroelement pol polyprotein see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence.
|
0.0
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: hypothetical protein VITISV_004415 [Vitis vinifera]
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene64615
|
SustainPine v2.0
|
384
|
|
• AutoFact: ADP-ribosylation factor GTPase-activating protein AGD2 [Arabidopsis thaliana] sp|Q9C6C3.1|AGD2_ARATH RecName: Full=ADP-ribosylation factor GTPase-activating protein AGD2; Short=ARF GAP AGD2; AltName: Full=Protein ARF-GAP DOMAIN 2; Short=AtAGD2 gb|AAG51867
|
4.0e-14
|
|
• FL-Next: sp=ADP-ribosylation factor GTPase-activating protein AGD2; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: adp-ribosylation factor gtpase-activating protein agd3-like
|
3.81284e-28
|
|
Internal
|
|
sp_v2.0_unigene64657
|
SustainPine v2.0
|
500
|
|
• AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: polx_tobac ame: full=retrovirus-related pol polyprotein from transposon tnt 1-94 includes: ame: full=protease includes: ame: full=reverse transcriptase includes: ame: full=endonuclease
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene65131
|
SustainPine v2.0
|
288
|
|
• AutoFact: RVT_2 domain containing protein
|
4.0e-26
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: hypothetical protein VITISV_028342 [Vitis vinifera]
|
1.91795e-25
|
|
Internal
|
|
sp_v2.0_unigene65141
|
SustainPine v2.0
|
714
|
|
• AutoFact: ARF-GAP protein n=1 Tax=Phytolacca acinosa RepID=E7BQV8_PHYAN
|
7.0e-27
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: adp-ribosylation factor gtpase-activating protein agd12
|
3.96998e-28
|
|
N-terminus
|
|
sp_v2.0_unigene66558
|
SustainPine v2.0
|
369
|
|
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL
|
4.0e-30
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
8.94806e-30
|
|
Internal
|
|
sp_v2.0_unigene66756
|
SustainPine v2.0
|
350
|
|
• AutoFact: GK15001 gene product from transcript GK15001-RA
|
2.0e-20
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
5.69106e-27
|
|
Internal
|
|
sp_v2.0_unigene67408
|
SustainPine v2.0
|
423
|
|
• AutoFact: putative oxysterol binding protein [Oryza sativa Japonica Group]
|
8.0e-30
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: oxysterol-binding protein 2a-like
|
1.50946e-37
|
|
C-terminus
|
|
sp_v2.0_unigene68182
|
SustainPine v2.0
|
381
|
|
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE
|
1.0e-28
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: copia-type polyprotein
|
4.18805e-33
|
|
Internal
|
|
sp_v2.0_unigene71635
|
SustainPine v2.0
|
399
|
|
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL
|
0.0
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene74085
|
SustainPine v2.0
|
358
|
|
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QP36_ORYSJ
|
1.0e-24
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: retrotransposon ty1-copia subclass
|
2.00223e-28
|
|
Internal
|
|
sp_v2.0_unigene74103
|
SustainPine v2.0
|
438
|
|
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL
|
7.0e-31
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
9.23952e-36
|
|
Internal
|
|
sp_v2.0_unigene74215
|
SustainPine v2.0
|
443
|
|
• AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME
|
5.0e-32
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
1.4665e-36
|
|
Internal
|
