Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Ribosomal protein L22/L17, conserved site

Term: IPR018260  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene40 SustainPine v2.0 2986
AutoFact: pfam04389, Peptidase_M28, Peptidase family M28 4.99983e-42
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: zn-dependent exopeptidase-like protein 0.0
Complete
sp_v2.0_unigene1883 SustainPine v2.0 881
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nucleoporin nup188-like protein 0.0
C-terminus
sp_v2.0_unigene8218 SustainPine v2.0 1662
AutoFact: ribosomal protein L17-1 [Poa secunda] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l17 0.0
Putative Complete
sp_v2.0_unigene15435 SustainPine v2.0 1111
AutoFact: ribosomal protein [Petunia x hybrida] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l17-2-like 0.0
Complete
sp_v2.0_unigene15542 SustainPine v2.0 1396
AutoFact: ribosomal protein [Petunia x hybrida] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein 0.0
Complete
sp_v2.0_unigene18829 SustainPine v2.0 1046
AutoFact: RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplastic; Flags: Precursor gb|AAA33680.1| nuclear encoded precursor to chloroplast protein [Pisum sativum] 0.0
FL-Next: sp=Chaperone protein ClpC, chloroplastic; Pisum sativum (Garden pea). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
N-terminus
sp_v2.0_unigene21084 SustainPine v2.0 1138
AutoFact: ATP-dependent Clp protease ATP-binding subunit ClpC [Arabidopsis thaliana] dbj|BAB08738.1| ATP-dependent Clp protease, ATP-binding subunit [Arabidopsis thaliana] gb|AAM26692.1| AT5g50920/K3K7_7 [Arabidopsis thaliana] dbj|BAE99213.1| ATP-dependent Clp prot 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent clp 0.0
Putative C-terminus
sp_v2.0_unigene28467 SustainPine v2.0 1898
AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
Complete
sp_v2.0_unigene30360 SustainPine v2.0 624
AutoFact: Shaker-like potassium channel n=4 Tax=Vitis vinifera RepID=Q84LA0_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: shaker-like potassium channel 0.0
Internal
sp_v2.0_unigene31305 SustainPine v2.0 655
AutoFact: Unassigned protein
FL-Next: sp=Helicase protein MOM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
sp_v2.0_unigene41472 SustainPine v2.0 467
AutoFact: Potassium channel GORK n=1 Tax=Arabidopsis thaliana RepID=GORK_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium channel skor 0.0
Internal
sp_v2.0_unigene51678 SustainPine v2.0 352
AutoFact: 60S ribosomal protein L17 n=5 Tax=Apocrita RepID=E2ABF3_9HYME 6.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l17-like isoform 3 2.84884e-42
Putative C-terminus
sp_v2.0_unigene57511 SustainPine v2.0 616
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RQX8_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene60982 SustainPine v2.0 599
AutoFact: 60S ribosomal protein L17 [Zea mays] sp|O48557.1|RL17_MAIZE RecName: Full=60S ribosomal protein L17 gb|AAB88619.1| ribosomal protein L17 [Zea mays] 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s29 3.50745e-37
Complete
sp_v2.0_unigene61895 SustainPine v2.0 573
AutoFact: ribosomal protein L17-1 [Poa secunda] 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l17-2-like 2.24864e-40
C-terminus
sp_v2.0_unigene76876 SustainPine v2.0 1069
AutoFact: 101 kDa heat shock protein n=3 Tax=Solanaceae RepID=Q9ZT13_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock protein 101 0.0
N-terminus
sp_v2.0_unigene77594 SustainPine v2.0 233
AutoFact: Unassigned protein
unknown
sp_v2.0_unigene79980 SustainPine v2.0 396
AutoFact: Heat shock protein 101 n=20 Tax=Poaceae RepID=HS101_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock protein 101 0.0
Internal
sp_v2.0_unigene85350 SustainPine v2.0 606
AutoFact: guard cell outward rectifying K+ channel [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium channel skor-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain