Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Alanyl-tRNA synthetase, class IIc, N-terminal

Term: IPR018164  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1340 SustainPine v2.0 3130
AutoFact: Alanyl-tRNA synthetase n=4 Tax=Arabidopsis RepID=SYA_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alanyl-trna synthetase 0.0
Putative Complete
sp_v2.0_unigene10256 SustainPine v2.0 872
AutoFact: Probable alanyl-tRNA synthetase, chloroplastic n=1 Tax=Populus trichocarpa RepID=SYAP_POPTR 0.0
FL-Next: sp=Probable alanyl-tRNA synthetase, chloroplastic; subsp. trichocarpa). 0.0
Blast2go: alanyl-trna synthetase 0.0
C-terminus
sp_v2.0_unigene16069 SustainPine v2.0 1244
AutoFact: putative nucleotide binding protein [Arabidopsis thaliana] gb|AEE75838.1| putative nucleotide binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleotide binding protein 0.0
Complete
sp_v2.0_unigene18598 SustainPine v2.0 682
AutoFact: XRCC4 homolog [Populus nigra] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna repair protein xrcc4 0.0
N-terminus
sp_v2.0_unigene19173 SustainPine v2.0 435
AutoFact: Putative cytosolic tRNA-Ala synthetase [Oryza sativa Japonica Group] 4.0e-13
FL-Next: sp=Alanyl-tRNA synthetase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: alanyl-trna synthetase 6.92078e-16
Putative N-terminus
sp_v2.0_unigene22806 SustainPine v2.0 798
AutoFact: plastid fibrillin 3 [Coffea canephora] 0.0
FL-Next: sp=Probable plastid-lipid-associated protein 4, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable plastid-lipid-associated protein chloroplastic-like 0.0
Complete
sp_v2.0_unigene23216 SustainPine v2.0 1143
AutoFact: Structural molecule, putative n=1 Tax=Ricinus communis RepID=B9SRI7_RICCO 0.0
FL-Next: sp=Probable plastid-lipid-associated protein 4, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable plastid-lipid-associated protein chloroplastic-like 0.0
Complete
sp_v2.0_unigene39286 SustainPine v2.0 416
AutoFact: alanyl-tRNA synthetase [Arabidopsis thaliana] sp|Q9FFC7.2|SYAP_ARATH RecName: Full=Probable alanyl-tRNA synthetase, chloroplastic; AltName: Full=Alanine--tRNA ligase; Short=AlaRS; AltName: Full=Protein EMBRYO DEFECTIVE 1030; AltName: Full=Protein EMBRYO D 5.99994e-41
FL-Next: sp=Probable alanyl-tRNA synthetase, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: alanyl-trna synthetase 0.0
Internal
sp_v2.0_unigene41753 SustainPine v2.0 418
AutoFact: putative leucyl-tRNA synthetase [Oryza sativa Japonica Group] 1.0e-32
FL-Next: tr=Leucyl-tRNA synthetase, putative, expressed; Triticum aestivum (Wheat). 0.0
Blast2go: leucyl-trna synthetase 3.01292e-34
Internal
sp_v2.0_unigene42519 SustainPine v2.0 492
AutoFact: Probable alanyl-tRNA synthetase, chloroplastic n=1 Tax=Populus trichocarpa RepID=SYAP_POPTR 0.0
FL-Next: sp=Probable alanyl-tRNA synthetase, chloroplastic; subsp. trichocarpa). 0.0
Blast2go: alanyl-trna synthetase 0.0
Internal
sp_v2.0_unigene45791 SustainPine v2.0 199
AutoFact: alanyl-tRNA synthetase [Arabidopsis thaliana] sp|Q9FFC7.2|SYAP_ARATH RecName: Full=Probable alanyl-tRNA synthetase, chloroplastic; AltName: Full=Alanine--tRNA ligase; Short=AlaRS; AltName: Full=Protein EMBRYO DEFECTIVE 1030; AltName: Full=Protein EMBRYO D 3.0e-14
FL-Next: sp=Probable alanyl-tRNA synthetase, chloroplastic; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: alanyl-trna synthetase 2.02786e-23
Internal
sp_v2.0_unigene61526 SustainPine v2.0 782
AutoFact: putative nucleotide binding protein [Arabidopsis thaliana] gb|AEE75837.1| putative nucleotide binding protein [Arabidopsis thaliana] 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleotide binding protein 0.0
Complete
sp_v2.0_unigene68967 SustainPine v2.0 653
AutoFact: leucyl-tRNA synthetase [Arabidopsis thaliana] gb|AAD36946.1|AF069441_6 putative leucyl tRNA synthetase [Arabidopsis thaliana] emb|CAB77903.1| putative leucyl tRNA synthetase [Arabidopsis thaliana] gb|AAL84999.1| AT4g04350/T19B17_7 [Arabidopsis thaliana] g 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: leucyl-trna synthetase 0.0
Internal
sp_v2.0_unigene76738 SustainPine v2.0 343
AutoFact: putative leucyl-tRNA synthetase [Oryza sativa Japonica Group] 2.0e-33
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: leucyl-trna synthetase 1.12244e-42
Internal
sp_v2.0_unigene80511 SustainPine v2.0 528
AutoFact: PAP fibrillin [Medicago truncatula] 9.99967e-42
FL-Next: sp=Probable plastid-lipid-associated protein 4, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable plastid-lipid-associated protein chloroplastic-like 2.1594e-42
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain