Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: tRNA-binding domain

Term: IPR002547  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1002 SustainPine v2.0 3083
AutoFact: methionyl-tRNA synthetase [Oryza sativa] 0.0
FL-Next: sp=Probable methionyl-tRNA synthetase; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: methionyl-trna synthetase 0.0
Complete
sp_v2.0_unigene7623 SustainPine v2.0 1332
AutoFact: Nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana] emb|CAB75817.1| putative protein [Arabidopsis thaliana] gb|AAK76594.1| unknown protein [Arabidopsis thaliana] gb|AAM44914.1| unknown protein [Arabidopsis thaliana] gb|AAM63861.1| unknown [A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene8938 SustainPine v2.0 631
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: multisynthetase complex auxiliary component p43 1.61398e-11
C-terminus
sp_v2.0_unigene19125 SustainPine v2.0 1655
AutoFact: methionyl-tRNA synthetase (ISS) [Ostreococcus tauri] emb|CAL49998.1| methionyl-tRNA synthetase (ISS) [Ostreococcus tauri] 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methionyl-trna synthetase 0.0
Complete
sp_v2.0_unigene20735 SustainPine v2.0 571
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: aminoacyl trna synthase complex-interacting multifunctional protein 1-like 1.56861e-13
C-terminus
sp_v2.0_unigene20809 SustainPine v2.0 2995
AutoFact: Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TK03_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 5b 0.0
Complete
sp_v2.0_unigene21537 SustainPine v2.0 881
AutoFact: OB-fold nucleic acid binding domain-containing protein n=2 Tax=Arabidopsis RepID=Q93VB0_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene25264 SustainPine v2.0 2900
AutoFact: methionyl-tRNA synthetase [Oryza sativa] 0.0
FL-Next: sp=Probable methionyl-tRNA synthetase; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: methionyl-trna synthetase 0.0
Complete
sp_v2.0_unigene33580 SustainPine v2.0 570
AutoFact: methionyl-tRNA synthetase [Bacteroides fragilis YCH46] ref|ZP_04843858.1| methionyl-tRNA synthetase [Bacteroides sp. 3_2_5] ref|ZP_06094931.1| methionyl-tRNA synthetase [Bacteroides sp. 2_1_16] ref|ZP_08592150.1| methionyl-tRNA synthetase [Bacteroides sp. 2.0e-11
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: methionyl-trna synthetase 0.0
Putative C-terminus
sp_v2.0_unigene33852 SustainPine v2.0 451
AutoFact: Methionine-tRNA synthetase, putative n=1 Tax=Ricinus communis RepID=B9RWD7_RICCO 4.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methionyl-trna synthetase 3.49475e-39
Internal
sp_v2.0_unigene78620 SustainPine v2.0 852
AutoFact: Methionyl-tRNA synthetase-like protein n=2 Tax=Oryza sativa RepID=Q8RUP8_ORYSJ 1.0e-13
FL-Next: sp=Probable methionyl-tRNA synthetase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: methionyl-trna synthetase 7.75332e-16
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain