Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: CYC/TB1, R domain

Term: IPR017888  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene261 SustainPine v2.0 2140
AutoFact: transcription factor TCP4 [Arabidopsis thaliana] ref|NP_850589.1| transcription factor TCP4 [Arabidopsis thaliana] ref|NP_001189896.1| transcription factor TCP4 [Arabidopsis thaliana] sp|Q8LPR5.1|TCP4_ARATH RecName: Full=Transcription factor TCP4; AltName 9.0e-34
FL-Next: sp=Transcription factor TCP4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription factor tcp4 4.49701e-39
Complete
sp_v2.0_unigene1782 SustainPine v2.0 1576
AutoFact: transcription factor PCF6 [Oryza sativa Japonica Group] 9.0e-17
FL-Next: sp=Transcription factor PCF6; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: tb1-like tcp family transcription factor 9.97864e-19
C-terminus
sp_v2.0_unigene10182 SustainPine v2.0 866
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TKA8_VITVI 2.0e-25
FL-Next: sp=Transcription factor TCP24; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: tb1-like tcp family transcription factor 3.45064e-29
N-terminus
sp_v2.0_unigene25028 SustainPine v2.0 815
AutoFact: TB1-like TCP family transcription factor (Fragment) n=67 Tax=Helianthus RepID=F5AIS2_HELAN 2.0e-17
FL-Next: sp=Transcription factor TCP2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: tb1-like tcp family transcription factor 1.00945e-22
Putative N-terminus
sp_v2.0_unigene28647 SustainPine v2.0 738
AutoFact: TB1-like TCP family transcription factor (Fragment) n=67 Tax=Helianthus RepID=F5AIS2_HELAN 4.0e-17
FL-Next: sp=Transcription factor TCP2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: tb1-like tcp family transcription factor 1.53462e-21
Putative N-terminus
sp_v2.0_unigene43864 SustainPine v2.0 478
AutoFact: TB1-like TCP family transcription factor (Fragment) n=67 Tax=Helianthus RepID=F5AIS2_HELAN 1.0e-19
FL-Next: Isoform 2 of Transcription factor TCP13 OS=Arabidopsis thaliana GN=TCP13 0.0
Blast2go: tb1-like tcp family transcription factor 7.1674e-24
Internal
sp_v2.0_unigene59549 SustainPine v2.0 1671
AutoFact: Putative transcription factor PCF6 n=1 Tax=Oryza sativa Japonica Group RepID=Q7XIX9_ORYSJ 1.0e-24
FL-Next: Isoform 2 of Transcription factor TCP13 OS=Arabidopsis thaliana GN=TCP13 0.0
Blast2go: tb1-like tcp family transcription factor 1.37772e-27
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain