Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Beta tubulin, autoregulation binding site

Term: IPR013838  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene30325 SustainPine v2.0 690
AutoFact: Heavy metal ATPase n=1 Tax=Populus trichocarpa RepID=B9GWH1_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heavy metal p-type atpase 0.0
Internal
sp_v2.0_unigene30372 SustainPine v2.0 460
AutoFact: Serine-threonine protein kinase, plant-type, putative n=1 Tax=Ricinus communis RepID=B9SNX7_RICCO 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine-threonine protein plant- 0.0
Internal
sp_v2.0_unigene30498 SustainPine v2.0 1529
AutoFact: pfam02365, NAM, No apical meristem (NAM) protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac protein 1 0.0
Complete
sp_v2.0_unigene30615 SustainPine v2.0 357
AutoFact: unconventional myosin [Helianthus annuus] 6.0e-33
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: unconventional myosin 3.92364e-44
Putative Complete
sp_v2.0_unigene30658 SustainPine v2.0 1622
AutoFact: exosome complex component RRP4 [Arabidopsis thaliana] gb|AAC72108.1| Similar to hypothetical protein SPAC2F7.14c gi|1052797 from Schizosaccharomyces pombe cosmid gb|Z50142 [Arabidopsis thaliana] gb|AAQ65156.1| At1g03360 [Arabidopsis thaliana] dbj|BAD43995 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex component rrp4-like 0.0
Putative Complete
sp_v2.0_unigene30995 SustainPine v2.0 317
AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 2.0e-25
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: retrotransposon gag protein 1.39486e-29
Putative N-terminus
sp_v2.0_unigene31095 SustainPine v2.0 1697
AutoFact: Somatic embryogenesis receptor-like kinase 1 n=2 Tax=Coniferales RepID=D1MEH6_9CONI 0.0
FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Araucaria angustifolia. 0.0
Blast2go: somatic embryogenesis receptor kinase 0.0
C-terminus
sp_v2.0_unigene31801 SustainPine v2.0 249
AutoFact: NAC domain protein, IPR003441 n=1 Tax=Populus trichocarpa RepID=B9HZY6_POPTR 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain ipr003441 2.00058e-25
Internal
sp_v2.0_unigene32292 SustainPine v2.0 1235
AutoFact: putative RNA-binding protein RBP37 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene32342 SustainPine v2.0 1058
AutoFact: Tubulin beta-2/beta-3 chain n=340 Tax=Eukaryota RepID=TBB2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubulin beta-2 beta-3 chain 0.0
C-terminus
sp_v2.0_unigene32386 SustainPine v2.0 1240
AutoFact: putative receptor-like kinase (with alternative splicing) [Oryza sativa Japonica Group] gb|ABF98430.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed [Oryza sativa Japonica Group] gb|ABF98431.1| BRASSINOSTEROID I 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: brassinosteroid insensitive 1-associated receptor kinase 1 expressed 0.0
C-terminus
sp_v2.0_unigene32638 SustainPine v2.0 533
AutoFact: Serine-threonine protein kinase, plant-type, putative n=1 Tax=Ricinus communis RepID=B9T632_RICCO 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cysteine-rich receptor-like protein kinase 0.0
Internal
sp_v2.0_unigene33267 SustainPine v2.0 785
AutoFact: copper-transporting ATPase RAN1 [Arabidopsis thaliana] sp|Q9S7J8.1|AHM5_ARATH RecName: Full=Copper-transporting ATPase RAN1; AltName: Full=Protein RESPONSIVE TO ANTAGONIST 1 gb|AAD29109.1|AF082565_1 ATP dependent copper transporter [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heavy metal atpase 0.0
Internal
sp_v2.0_unigene34065 SustainPine v2.0 1178
AutoFact: NAM-like protein [Arabidopsis thaliana] gb|AAN15611.1| NAM-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain ipr003441 0.0
Complete
sp_v2.0_unigene34207 SustainPine v2.0 322
AutoFact: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, putative n=1 Tax=Ricinus communis RepID=B9SHD1_RICCO 8.0e-22
FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Pinus massoniana. 0.0
Blast2go: leucine-rich repeat receptor-like kinase 4.51074e-26
Internal
sp_v2.0_unigene35192 SustainPine v2.0 470
AutoFact: protein phosphatase 2C-like [Arabidopsis thaliana] 5.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 8.25146e-20
N-terminus
sp_v2.0_unigene35338 SustainPine v2.0 1072
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable helicase ddb_g0274399-like 0.0
C-terminus
sp_v2.0_unigene35666 SustainPine v2.0 983
AutoFact: diacylglycerol kinase 2 [Arabidopsis thaliana] dbj|BAB10470.1| diacylglycerol kinase [Arabidopsis thaliana] gb|AAL32733.1| diacylglycerol kinase [Arabidopsis thaliana] gb|AAP68231.1| At5g63770 [Arabidopsis thaliana] gb|AAR28755.1| diacylglycerol kinase 2 0.0
FL-Next: sp=Diacylglycerol kinase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: diacylglycerol kinase 1-like 0.0
C-terminus
sp_v2.0_unigene35860 SustainPine v2.0 769
AutoFact: Myosin class 11-1 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX1_ADICA 0.0
FL-Next: tr=Myosin class 11-1; Adiantum capillus-veneris (Maidenhair fern). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene36043 SustainPine v2.0 793
AutoFact: Copper-transporting ATPase RAN1 n=4 Tax=Brassicaceae RepID=AHM5_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp dependent copper transporter 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain