Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Beta tubulin, autoregulation binding site

Term: IPR013838  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene15267 SustainPine v2.0 505
AutoFact: diacylglycerol kinase [Arabidopsis thaliana] 2.0e-39
FL-Next: sp=Diacylglycerol kinase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: diacylglycerol kinase 0.0
Internal
sp_v2.0_unigene15437 SustainPine v2.0 1742
AutoFact: Tubulin beta-2/beta-3 chain n=340 Tax=Eukaryota RepID=TBB2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubulin beta chain 0.0
Complete
sp_v2.0_unigene15911 SustainPine v2.0 1564
AutoFact: Tubulin alpha-6 chain n=85 Tax=Eukaryota RepID=TBA6_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha tubulin 1 0.0
C-terminus
sp_v2.0_unigene16071 SustainPine v2.0 1864
AutoFact: NAC protein 1 [Elaeis guineensis] gb|ABB72844.1| NAC protein 1 splice variant 2 [Elaeis guineensis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac1 transcription factor 0.0
Complete
sp_v2.0_unigene16217 SustainPine v2.0 1637
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta chain 0.0
Complete
sp_v2.0_unigene16782 SustainPine v2.0 1831
AutoFact: exosome complex component RRP4 [Arabidopsis thaliana] gb|AAC72108.1| Similar to hypothetical protein SPAC2F7.14c gi|1052797 from Schizosaccharomyces pombe cosmid gb|Z50142 [Arabidopsis thaliana] gb|AAQ65156.1| At1g03360 [Arabidopsis thaliana] dbj|BAD43995 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex component rrp4-like 0.0
Complete
sp_v2.0_unigene16913 SustainPine v2.0 1548
AutoFact: exosome complex component RRP4 [Arabidopsis thaliana] gb|AAC72108.1| Similar to hypothetical protein SPAC2F7.14c gi|1052797 from Schizosaccharomyces pombe cosmid gb|Z50142 [Arabidopsis thaliana] gb|AAQ65156.1| At1g03360 [Arabidopsis thaliana] dbj|BAD43995 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex component rrp4-like 0.0
Putative Complete
sp_v2.0_unigene16989 SustainPine v2.0 2804
AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain ipr003441 0.0
Complete
sp_v2.0_unigene17137 SustainPine v2.0 533
AutoFact: NAC domain containing protein 96 [Arabidopsis thaliana] dbj|BAA97530.1| NAM-like [Arabidopsis thaliana] gb|AAV85660.1| At5g46590 [Arabidopsis thaliana] gb|AAW70401.1| At5g46590 [Arabidopsis thaliana] dbj|BAH30616.1| hypothetical protein [Arabidopsis thali 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain protein 0.0
N-terminus
sp_v2.0_unigene17141 SustainPine v2.0 985
AutoFact: NAC domain containing protein 47 [Arabidopsis thaliana] gb|AAO64920.1| At3g04070 [Arabidopsis thaliana] dbj|BAE99421.1| NAM-like protein [Arabidopsis thaliana] gb|AEE74033.1| NAC domain containing protein 47 [Arabidopsis thaliana] 6.02558e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain containing protein 47 0.0
Putative Complete
sp_v2.0_unigene17179 SustainPine v2.0 562
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta chain 0.0
N-terminus
sp_v2.0_unigene17310 SustainPine v2.0 1106
AutoFact: putative S-locus protein kinase [Arabidopsis thaliana] sp|O64776.2|Y1144_ARATH RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At1g61440; Flags: Precursor gb|AEE33838.1| putative S-locus protein kinase [Arabidopsis thaliana] 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.22898e-12
Internal
sp_v2.0_unigene18139 SustainPine v2.0 1340
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene18597 SustainPine v2.0 1573
AutoFact: leucine-rich repeat receptor-like kinase [Ipomoea batatas] 0.0
FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Araucaria angustifolia. 0.0
Blast2go: brassinosteroid insensitive 1-associated receptor kinase 1 0.0
C-terminus
sp_v2.0_unigene19274 SustainPine v2.0 510
AutoFact: Phosphatidic acid phosphatase beta n=3 Tax=Phaseoleae RepID=Q9FVL1_VIGUN 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lipid phosphate phosphatase 3 5.61749e-33
N-terminus
sp_v2.0_unigene19543 SustainPine v2.0 368
AutoFact: cysteine-rich receptor-like protein kinase 13 [Arabidopsis thaliana] sp|Q0PW40.1|CRK13_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 13; Short=Cysteine-rich RLK13; Flags: Precursor gb|ABG74916.1| cysteine-rich receptor-like kinase 13 [Ara 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.51263e-37
Internal
sp_v2.0_unigene20212 SustainPine v2.0 308
AutoFact: NAC domain protein, IPR003441 n=2 Tax=Populus trichocarpa RepID=B9GU14_POPTR 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain protein 6.74854e-23
Internal
sp_v2.0_unigene20280 SustainPine v2.0 615
AutoFact: putative galactinol--sucrose galactosyltransferase 6 [Arabidopsis thaliana] gb|AAL90901.1| AT5g20250/F5O24_140 [Arabidopsis thaliana] gb|AAN18198.1| At5g20250/F5O24_140 [Arabidopsis thaliana] dbj|BAE99252.1| seed imbitition protein-like [Arabidopsis thali 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: galactinol--sucrose galactosyltransferase 6 0.0
N-terminus
sp_v2.0_unigene20700 SustainPine v2.0 887
AutoFact: Diacylglycerol kinase, theta, putative n=1 Tax=Ricinus communis RepID=B9RLR5_RICCO 0.0
FL-Next: sp=Diacylglycerol kinase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: diacylglycerol kinase 0.0
Internal
sp_v2.0_unigene20820 SustainPine v2.0 549
AutoFact: Myosin class 11-1 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX1_ADICA 0.0
FL-Next: tr=Myosin class 11-1; Adiantum capillus-veneris (Maidenhair fern). 0.0
Blast2go: myosin-h heavy chain-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain