Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Beta tubulin, autoregulation binding site

Term: IPR013838  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene83470 SustainPine v2.0 747
AutoFact: Multicopper oxidase, type 1 n=1 Tax=Medicago truncatula RepID=A2Q4H7_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: l-ascorbate oxidase homolog 0.0
Internal
sp_v2.0_unigene84247 SustainPine v2.0 256
AutoFact: NAC protein 1 n=2 Tax=Elaeis guineensis RepID=Q2XQF5_ELAGV 8.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac protein 1 2.14027e-24
N-terminus
sp_v2.0_unigene84884 SustainPine v2.0 662
AutoFact: transcriptional co-repressor -like [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
Internal
sp_v2.0_unigene84918 SustainPine v2.0 180
AutoFact: RecName: Full=40S ribosomal protein S3a; AltName: Full=Protein cyc07 dbj|BAA89498.1| cyc07 [Daucus carota] 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s3a 7.99361e-20
Internal
sp_v2.0_unigene85348 SustainPine v2.0 511
AutoFact: Tubulin beta chain, putative n=2 Tax=Eukaryota RepID=B9S382_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-tubulin 0.0
Internal
sp_v2.0_unigene85358 SustainPine v2.0 1086
AutoFact: putative receptor-like kinase (with alternative splicing) [Oryza sativa Japonica Group] gb|ABF98430.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed [Oryza sativa Japonica Group] gb|ABF98431.1| BRASSINOSTEROID I 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: brassinosteroid insensitive 1-associated receptor kinase 1 expressed 0.0
C-terminus
sp_v2.0_unigene85658 SustainPine v2.0 502
AutoFact: protein phosphatase 2C (PP2C) [Fagus sylvatica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 2c 0.0
Putative C-terminus
sp_v2.0_unigene85940 SustainPine v2.0 181
AutoFact: Somatic embryogenesis receptor-like kinase 1 n=2 Tax=Coniferales RepID=D1MEH6_9CONI 1.0e-21
FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Pinus massoniana. 0.0
Blast2go: somatic embryogenesis receptor-like kinase 1.19909e-28
Internal
sp_v2.0_unigene86142 SustainPine v2.0 1020
AutoFact: MEI2-like protein 4 [Arabidopsis thaliana] sp|Q9LYN7.1|AML4_ARATH RecName: Full=Protein MEI2-like 4; Short=AML4; AltName: Full=MEI2-like protein 4 emb|CAB87285.1| Mei2-like protein [Arabidopsis thaliana] dbj|BAE99028.1| Mei2-like protein [Arabidopsis thal 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein mei2-like 4-like 0.0
C-terminus
sp_v2.0_unigene86230 SustainPine v2.0 941
AutoFact: Somatic embryogenesis receptor-like kinase 1 n=2 Tax=Coniferales RepID=D1MEH6_9CONI 0.0
FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Pinus massoniana. 0.0
Blast2go: somatic embryogenesis receptor kinase 0.0
C-terminus
sp_v2.0_unigene86241 SustainPine v2.0 1375
AutoFact: Alpha-1,6-xylosyltransferase n=2 Tax=Pinaceae RepID=Q5TIN4_PINTA 0.0
FL-Next: tr=Alpha-1,6-xylosyltransferase; Pinus taeda (Loblolly pine). 0.0
Blast2go: xyloglucan 6-xylosyltransferase 0.0
C-terminus
sp_v2.0_unigene86388 SustainPine v2.0 1722
AutoFact: Catalase n=3 Tax=Picea sitchensis RepID=A9NUY8_PICSI 0.0
FL-Next: sp=Catalase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: catalase 1 0.0
Complete
sp_v2.0_unigene87489 SustainPine v2.0 306
AutoFact: pfam07731, Cu-oxidase_2, Multicopper oxidase 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: l-ascorbate oxidase homolog 0.0
C-terminus
sp_v2.0_unigene92009 SustainPine v2.0 1001
AutoFact: protein phosphatase 2C homolog [Mesembryanthemum crystallinum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 0.0
N-terminus
sp_v2.0_unigene92450 SustainPine v2.0 681
AutoFact: Tubulin beta-2/beta-3 chain n=340 Tax=Eukaryota RepID=TBB2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-tubulin 0.0
Internal
sp_v2.0_unigene92477 SustainPine v2.0 1309
AutoFact: Alpha-tubulin n=3 Tax=Foraminifera RepID=Q26233_RETFI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-1 tubulin 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain