Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Beta tubulin, autoregulation binding site

Term: IPR013838  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene79931 SustainPine v2.0 520
AutoFact: RNA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9T1D4_RICCO 8.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ctc-interacting domain 11 protein 0.0
N-terminus
sp_v2.0_unigene79991 SustainPine v2.0 1713
AutoFact: Tubulin alpha-2/alpha-4 chain n=384 Tax=Eukaryota RepID=TBA2_ARATH 0.0
FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
Blast2go: alpha tubulin 1 0.0
Complete
sp_v2.0_unigene80006 SustainPine v2.0 1355
AutoFact: Multicopper oxidase, type 1 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: l-ascorbate oxidase homolog 0.0
Putative Complete
sp_v2.0_unigene80043 SustainPine v2.0 484
AutoFact: Cyc07 (Fragment) n=1 Tax=Vitis vinifera RepID=Q58T36_VITVI 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s3a 6.38198e-33
C-terminus
sp_v2.0_unigene80154 SustainPine v2.0 585
AutoFact: RecName: Full=Cytochrome P450 720B2; AltName: Full=Cytochrome P450 CYPB gb|AAX07432.1| cytochrome P450 CYPB [Pinus taeda] 0.0
FL-Next: tr=CYP720B2; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: c72b2_pinta ame: full=cytochrome p450 720b2 ame: full=cytochrome p450 cypb 0.0
Putative C-terminus
sp_v2.0_unigene80555 SustainPine v2.0 325
AutoFact: protein SKU5 similar 17 [Arabidopsis thaliana] gb|AAM19780.1| AT5g66920/MUD21_18 [Arabidopsis thaliana] gb|AAN38699.1| At5g66920/MUD21_18 [Arabidopsis thaliana] gb|AED98278.1| protein SKU5 similar 17 [Arabidopsis thaliana] 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: l-ascorbate oxidase-like protein 1.08055e-36
Internal
sp_v2.0_unigene80642 SustainPine v2.0 308
AutoFact: 40S ribosomal protein S3a n=8 Tax=fabids RepID=RS3A_CICAR 5.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.15788e-23
Internal
sp_v2.0_unigene80700 SustainPine v2.0 457
AutoFact: nectarin IV [Nicotiana langsdorffii x Nicotiana sanderae] 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: basic 7s globulin 2 precursor small 2.00018e-21
C-terminus
sp_v2.0_unigene80846 SustainPine v2.0 1230
AutoFact: Alpha-1,6-xylosyltransferase n=2 Tax=Pinaceae RepID=Q5TIN4_PINTA 0.0
FL-Next: tr=Alpha-1,6-xylosyltransferase; Pinus taeda (Loblolly pine). 0.0
Blast2go: xyloglucan 6-xylosyltransferase 0.0
C-terminus
sp_v2.0_unigene80879 SustainPine v2.0 888
AutoFact: Abietadienol/abietadienal oxidase n=1 Tax=Pinus taeda RepID=C72B1_PINTA 0.0
FL-Next: sp=Abietadienol/abietadienal oxidase; Pinus taeda (Loblolly pine). 0.0
Blast2go: c72b1_pinta ame: full=abietadienol abietadienal oxidase short= ame: full=cytochrome p450 720b1 ame: full=cytochrome p450 cypa 0.0
Internal
sp_v2.0_unigene81480 SustainPine v2.0 667
AutoFact: Tubulin beta chain, putative n=2 Tax=Eukaryota RepID=B9S382_RICCO 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubulin beta chain 0.0
Putative C-terminus
sp_v2.0_unigene81490 SustainPine v2.0 619
AutoFact: Putative histone deacetylase complex, SIN3 component (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T7L8_PHYPA 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v2.0_unigene81628 SustainPine v2.0 504
AutoFact: Multicopper oxidase, putative n=1 Tax=Ricinus communis RepID=B9SFQ4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: l-ascorbate oxidase homolog 0.0
Putative N-terminus
sp_v2.0_unigene81633 SustainPine v2.0 937
AutoFact: beta tubulin 2 [Hordeum vulgare subsp. vulgare] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cbr-tbb-4 protein 0.0
N-terminus
sp_v2.0_unigene81855 SustainPine v2.0 1045
AutoFact: Tubulin beta chain, putative n=1 Tax=Ricinus communis RepID=B9SB77_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubulin beta 0.0
C-terminus
sp_v2.0_unigene81962 SustainPine v2.0 1283
AutoFact: Tubulin alpha-1 chain (Fragment) n=3 Tax=Magnoliophyta RepID=A6MZU0_ORYSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-tubulin 0.0
Putative Complete
sp_v2.0_unigene81974 SustainPine v2.0 450
AutoFact: Multicopper oxidase, type 1 [Medicago truncatula] 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: l-ascorbate oxidase-like protein 1.43762e-36
C-terminus
sp_v2.0_unigene82048 SustainPine v2.0 733
AutoFact: alpha-tubulin 2 [Myxine glutinosa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-tubulin 0.0
Putative C-terminus
sp_v2.0_unigene82054 SustainPine v2.0 1047
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-tubulin 2 0.0
N-terminus
sp_v2.0_unigene82110 SustainPine v2.0 222
AutoFact: Beta-tubulin (Fragment) n=1 Tax=Spinacia oleracea RepID=A3FMG7_SPIOL 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubulin beta chain 4.03833e-20
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain