Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Beta tubulin, autoregulation binding site

Term: IPR013838  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene70430 SustainPine v2.0 450
AutoFact: Protein phosphatase-2c (Fragment) n=1 Tax=Mesembryanthemum crystallinum RepID=O82479_MESCR 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 2c 0.0
Internal
sp_v2.0_unigene70504 SustainPine v2.0 306
AutoFact: 40S ribosomal protein S3a n=5 Tax=Neoptera RepID=RS3A_BIPLU 8.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s3a 0.0
Putative C-terminus
sp_v2.0_unigene71084 SustainPine v2.0 262
AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 7.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: af378049_1reverse transcriptase 1.08763e-30
Putative Complete
sp_v2.0_unigene71217 SustainPine v2.0 405
AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 1.0e-27
FL-Next: tr=Retrotransposon gag protein; Asparagus officinalis (Garden asparagus). 0.0
Blast2go: retrotransposon gag protein 2.8911e-27
Internal
sp_v2.0_unigene71429 SustainPine v2.0 271
AutoFact: RVT_1 domain containing protein 3.0e-10
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: reverse transcriptase 8.96781e-34
Putative N-terminus
sp_v2.0_unigene72448 SustainPine v2.0 410
AutoFact: Alpha tubulin (Fragment) n=1 Tax=Porphyra yezoensis RepID=Q002F9_PORYE 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-tubulin 2.08413e-09
Internal
sp_v2.0_unigene74359 SustainPine v2.0 432
AutoFact: putative receptor-like kinase (with alternative splicing) [Oryza sativa Japonica Group] gb|ABF98430.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed [Oryza sativa Japonica Group] gb|ABF98431.1| BRASSINOSTEROID I 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: brassinosteroid insensitive 1-associated receptor kinase 1 expressed 1.15538e-17
C-terminus
sp_v2.0_unigene74449 SustainPine v2.0 347
AutoFact: putative RNA-binding protein RBP37 [Oryza sativa Japonica Group] 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein rbp37 4.89099e-27
Putative C-terminus
sp_v2.0_unigene74610 SustainPine v2.0 335
AutoFact: nectarin IV [Nicotiana langsdorffii x Nicotiana sanderae] 4.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: basic 7s globulin 2 precursor small 7.61705e-36
C-terminus
sp_v2.0_unigene74856 SustainPine v2.0 359
AutoFact: alpha-tubulin [Eucalyptus grandis] 6.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-tubulin 1.69106e-18
Internal
sp_v2.0_unigene76873 SustainPine v2.0 662
AutoFact: NAC domain containing protein 2 [Arabidopsis thaliana] gb|AAF35417.1| putative jasmonic acid regulatory protein [Arabidopsis thaliana] dbj|BAB20600.1| AtNAC2 [Arabidopsis thaliana] dbj|BAB02380.1| jasmonic acid regulatory protein-like [Arabidopsis thalian 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nam-like protein 0.0
N-terminus
sp_v2.0_unigene77146 SustainPine v2.0 426
AutoFact: DUF868 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene77533 SustainPine v2.0 532
AutoFact: putative RNA-binding protein RBP37 [Oryza sativa Japonica Group] dbj|BAG24017.1| RNA-binding protein [Oryza sativa Japonica Group] dbj|BAG95850.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEE67936.1| hypothetical protein OsJ_25822 [Oryza s 3.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 7.46344e-32
Internal
sp_v2.0_unigene77656 SustainPine v2.0 334
AutoFact: DUF588 multi-domain protein 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 1.99276e-38
C-terminus
sp_v2.0_unigene78035 SustainPine v2.0 235
AutoFact: NAM protein n=1 Tax=Petunia x hybrida RepID=Q40880_PETHY 6.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein cup-shaped cotyledon 2-like 2.47863e-19
Internal
sp_v2.0_unigene78506 SustainPine v2.0 1283
AutoFact: Tubulin alpha-1 chain (Fragment) n=3 Tax=Magnoliophyta RepID=A6MZU0_ORYSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubulin alpha-1 chain 0.0
Putative Complete
sp_v2.0_unigene78807 SustainPine v2.0 694
AutoFact: PREDICTED: tubulin beta-8 chain-like n=2 Tax=Macaca mulatta RepID=UPI0001D55545 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubulin-like protein 0.0
N-terminus
sp_v2.0_unigene78822 SustainPine v2.0 623
AutoFact: Putative NAM (no apical meristem) protein [Oryza sativa Japonica Group] gb|ABF95729.1| NAC domain transcription factor, putative, expressed [Oryza sativa Japonica Group] dbj|BAH01634.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain ipr003441 0.0
Putative N-terminus
sp_v2.0_unigene79297 SustainPine v2.0 390
AutoFact: putative RNA-binding protein RBP37 [Oryza sativa Japonica Group] 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 3.71296e-27
Internal
sp_v2.0_unigene79790 SustainPine v2.0 464
AutoFact: Leucine-rich repeat protein n=3 Tax=Glycine max RepID=C6ZRZ5_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: leucine-rich repeat-containing protein 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain