Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Beta tubulin, autoregulation binding site

Term: IPR013838  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene63732 SustainPine v2.0 725
AutoFact: Somatic embryogenesis receptor-like kinase 1 n=2 Tax=Coniferales RepID=D1MEH6_9CONI 1.0e-28
FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Pinus massoniana. 0.0
Blast2go: somatic embryogenesis receptor kinase 6.83956e-32
Internal
sp_v2.0_unigene63828 SustainPine v2.0 526
AutoFact: Phosphatidylserine synthase I-like n=3 Tax=Oryza sativa RepID=Q5N8Q3_ORYSJ 4.00001e-40
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: phosphatidylserine synthase 2 1.4013e-45
Putative N-terminus
sp_v2.0_unigene64285 SustainPine v2.0 474
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9S555_RICCO 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine protein 1.40438e-28
N-terminus
sp_v2.0_unigene64796 SustainPine v2.0 510
AutoFact: Alpha-tubulin (Fragment) n=1 Tax=Camellia sinensis RepID=Q646H4_CAMSI 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha- 4.0878e-25
C-terminus
sp_v2.0_unigene64891 SustainPine v2.0 786
AutoFact: putative phosphatidic acid phosphatase beta [Oryza sativa Japonica Group] dbj|BAD36473.1| putative phosphatidic acid phosphatase beta [Oryza sativa Japonica Group] dbj|BAG88546.1| unnamed protein product [Oryza sativa Japonica Group] 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphatidic acid phosphatase beta 0.0
N-terminus
sp_v2.0_unigene64952 SustainPine v2.0 440
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9S555_RICCO 1.0e-13
FL-Next: tr=Serine/threonine protein kinase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: serine threonine protein 2.588e-15
Internal
sp_v2.0_unigene64983 SustainPine v2.0 650
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.51385e-17
C-terminus
sp_v2.0_unigene65607 SustainPine v2.0 500
AutoFact: NO APICAL MERISTEM n=1 Tax=Aquilegia coerulea RepID=B8XRZ8_AQUCA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: no apical meristem 0.0
Internal
sp_v2.0_unigene66378 SustainPine v2.0 421
AutoFact: putative RNA-binding protein RBP37 [Oryza sativa Japonica Group] dbj|BAG24017.1| RNA-binding protein [Oryza sativa Japonica Group] dbj|BAG95850.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEE67936.1| hypothetical protein OsJ_25822 [Oryza s 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ctc-interacting domain 10 protein 0.0
Internal
sp_v2.0_unigene66580 SustainPine v2.0 502
AutoFact: Catalase n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RDR1_PHYPA 0.0
FL-Next: sp=Catalase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: catalase 0.0
Internal
sp_v2.0_unigene67255 SustainPine v2.0 504
AutoFact: Multicopper oxidase, type 1 [Medicago truncatula] 4.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: l-ascorbate oxidase-like protein 0.0
Internal
sp_v2.0_unigene67627 SustainPine v2.0 509
AutoFact: RNA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RYV7_RICCO 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ctc-interacting domain 9 protein 2.68551e-08
Internal
sp_v2.0_unigene67742 SustainPine v2.0 235
AutoFact: Beta tubulin 3 (Fragment) n=1 Tax=Hordeum vulgare RepID=Q9M407_HORVU 9.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubulin-like protein 2.91197e-20
Internal
sp_v2.0_unigene67862 SustainPine v2.0 283
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein loc100854191 2.09151e-18
Putative C-terminus
sp_v2.0_unigene69011 SustainPine v2.0 469
AutoFact: NXRV091_F10_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV091_F10 5' similar to Arabidopsis thaliana sequence At1g37060 Athila retroelment ORF 1, putative see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence. 0.0
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: uncharacterized protein loc100855032 5.88545e-44
Putative C-terminus
sp_v2.0_unigene69554 SustainPine v2.0 406
AutoFact: Carbohydrate oxidase n=1 Tax=Helianthus annuus RepID=Q8SA59_HELAN 1.0e-26
FL-Next: sp=Reticuline oxidase; Papaver somniferum (Opium poppy). 0.0
Blast2go: reticuline oxidase-like 3.80288e-33
Internal
sp_v2.0_unigene69856 SustainPine v2.0 391
AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 1.0e-31
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: uncharacterized protein loc100854181 1.83806e-38
Putative N-terminus
sp_v2.0_unigene70205 SustainPine v2.0 292
AutoFact: CTC-interacting domain 8 protein [Arabidopsis thaliana] gb|AEE32977.1| CTC-interacting domain 8 protein [Arabidopsis thaliana] 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v2.0_unigene70316 SustainPine v2.0 424
AutoFact: 60S ribosomal protein L11-1 n=51 Tax=Embryophyta RepID=RL111_ARATH 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l11 1.23851e-25
C-terminus
sp_v2.0_unigene70366 SustainPine v2.0 222
AutoFact: Beta-tubulin (Fragment) n=2 Tax=core eudicotyledons RepID=B3GQU8_CITMA 7.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain