Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Histone core

Term: IPR007125  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene61261 SustainPine v2.0 904
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 7.0e-34
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a-like protein 6.44597e-44
Complete
sp_v2.0_unigene61724 SustainPine v2.0 557
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b like protein 3.76597e-25
C-terminus
sp_v2.0_unigene62121 SustainPine v2.0 417
AutoFact: PREDICTED: histone H2A type 1-A-like n=2 Tax=Sus scrofa RepID=UPI0001E87492 2.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Complete
sp_v2.0_unigene63760 SustainPine v2.0 416
AutoFact: Histone H2A n=1 Tax=Sorghum bicolor RepID=C5YYL4_SORBI 2.0e-28
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 1.74626e-36
N-terminus
sp_v2.0_unigene64110 SustainPine v2.0 555
AutoFact: Histone H2A (Fragment) n=1 Tax=Hyacinthus orientalis RepID=Q5YJR4_HYAOR 4.0e-33
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a-like protein 1.97583e-43
Complete
sp_v2.0_unigene64230 SustainPine v2.0 474
AutoFact: Histone H2B.4 n=7 Tax=Arabidopsis RepID=H2B4_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
C-terminus
sp_v2.0_unigene64244 SustainPine v2.0 403
AutoFact: Histone H2B protein (Fragment) n=1 Tax=Pinus pinaster RepID=Q8VX93_PINPS 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2 2.53761e-41
C-terminus
sp_v2.0_unigene66399 SustainPine v2.0 606
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 2.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
Putative Complete
sp_v2.0_unigene66823 SustainPine v2.0 366
AutoFact: Histone H2AX n=7 Tax=Spermatophyta RepID=H2AX_PICAB 1.0e-18
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone 7.09788e-24
Putative N-terminus
sp_v2.0_unigene69471 SustainPine v2.0 358
AutoFact: histone H4 [Hyacinthus orientalis] 5.0e-33
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 8.96831e-44
Putative Complete
sp_v2.0_unigene70285 SustainPine v2.0 427
AutoFact: Histone H2A (Fragment) n=1 Tax=Hyacinthus orientalis RepID=Q5YJR4_HYAOR 2.0e-19
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a-like protein 8.86314e-26
Putative Complete
sp_v2.0_unigene70953 SustainPine v2.0 256
AutoFact: Histone H2B.5 n=3 Tax=Magnoliophyta RepID=H2B5_WHEAT 6.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: h2b5_wheat ame: full=histone ame: full=wch2b-6 9.25196e-11
N-terminus
sp_v2.0_unigene71278 SustainPine v2.0 317
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 3.0e-15
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone 2 1.07778e-19
C-terminus
sp_v2.0_unigene74221 SustainPine v2.0 192
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v2.0_unigene76811 SustainPine v2.0 484
AutoFact: Histone H2A n=2 Tax=Magnoliophyta RepID=B9REZ0_RICCO 8.0e-11
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h2a 2.90525e-13
N-terminus
sp_v2.0_unigene76874 SustainPine v2.0 810
AutoFact: Histone H2A n=1 Tax=Ricinus communis RepID=B9S3Z3_RICCO 1.0e-22
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 1.7058e-28
Putative Complete
sp_v2.0_unigene76972 SustainPine v2.0 640
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
Complete
sp_v2.0_unigene77134 SustainPine v2.0 427
AutoFact: Histone H2B.4 n=7 Tax=Arabidopsis RepID=H2B4_ARATH 4.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
C-terminus
sp_v2.0_unigene77357 SustainPine v2.0 516
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 8.00001e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
C-terminus
sp_v2.0_unigene78561 SustainPine v2.0 668
AutoFact: Histone H2B.5 n=60 Tax=Magnoliophyta RepID=H2B5_ORYSJ 1.0e-39
FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h2b 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain