Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Small GTPase superfamily, Rab type

Term: IPR003579  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene60688 SustainPine v2.0 1306
AutoFact: Rab family GTPase n=3 Tax=Selaginella moellendorffii RepID=D8RE14_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rab family gtpase 0.0
Complete
sp_v2.0_unigene61139 SustainPine v2.0 575
AutoFact: Rab family GTPase n=3 Tax=Selaginella moellendorffii RepID=D8RE14_SELML 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rab family gtpase 1.74317e-19
C-terminus
sp_v2.0_unigene61176 SustainPine v2.0 1224
AutoFact: Ras-related protein RABH1e n=4 Tax=Brassicaceae RepID=RAH1E_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-related protein rabh1e-like 0.0
Complete
sp_v2.0_unigene62419 SustainPine v2.0 1239
AutoFact: Ras-related protein RABH1e n=4 Tax=Brassicaceae RepID=RAH1E_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-related protein rabh1e-like 0.0
Complete
sp_v2.0_unigene62675 SustainPine v2.0 620
AutoFact: putative protein phosphatase 2C 76 [Arabidopsis thaliana] sp|Q94AT1.1|P2C76_ARATH RecName: Full=Probable protein phosphatase 2C 76; Short=AtPP2C76 gb|AAK76493.1| putative protein phosphatase 2C [Arabidopsis thaliana] gb|AAM14299.1| putative phosphatase 2C 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: catalytic protein phosphatase type 2c protein serine threonine phosphatase 0.0
Internal
sp_v2.0_unigene63048 SustainPine v2.0 393
AutoFact: Rab family GTPase n=1 Tax=Selaginella moellendorffii RepID=D8RRT7_SELML 6.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rab7 -family small gtpase 2.8026e-45
N-terminus
sp_v2.0_unigene63316 SustainPine v2.0 365
AutoFact: Rab-type small GTP-binding protein (Fragment) n=2 Tax=fabids RepID=Q9SXT6_CICAR 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-related protein rab7 8.40779e-45
C-terminus
sp_v2.0_unigene65096 SustainPine v2.0 375
AutoFact: Rab family GTPase n=1 Tax=Selaginella moellendorffii RepID=D8RPN0_SELML 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-related protein rab-18 1.66201e-28
Putative N-terminus
sp_v2.0_unigene65190 SustainPine v2.0 517
AutoFact: GTP-binding protein RAB2A, putative n=1 Tax=Brassica oleracea RepID=Q2A9B8_BRAOL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rab2 -family small gtpase 0.0
Putative N-terminus
sp_v2.0_unigene66473 SustainPine v2.0 440
AutoFact: Probable protein phosphatase 2C 59 n=5 Tax=Magnoliophyta RepID=P2C59_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 2c 0.0
Internal
sp_v2.0_unigene66495 SustainPine v2.0 287
AutoFact: Rab family GTPase n=1 Tax=Selaginella moellendorffii RepID=D8SWR5_SELML 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtp binding protein 0.0
Putative N-terminus
sp_v2.0_unigene68007 SustainPine v2.0 527
AutoFact: Rab family GTPase n=1 Tax=Selaginella moellendorffii RepID=D8SWR5_SELML 8.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtp binding protein 7.78042e-29
N-terminus
sp_v2.0_unigene68617 SustainPine v2.0 476
AutoFact: Protein phosphatase 2C-like [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 0.0
C-terminus
sp_v2.0_unigene69314 SustainPine v2.0 364
AutoFact: Rab-related small GTP-binding protein [Simmondsia chinensis] 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtp binding protein 3.55071e-34
C-terminus
sp_v2.0_unigene74530 SustainPine v2.0 296
AutoFact: Rab-like rab-type small G protein n=1 Tax=Thalassiosira pseudonana RepID=B8BY70_THAPS 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100273439 1.4212e-10
Putative N-terminus
sp_v2.0_unigene74727 SustainPine v2.0 424
AutoFact: Rab1/RabD-family small GTPase n=7 Tax=Embryophyta RepID=A9SLS3_PHYPA 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-related protein 3.83325e-40
Internal
sp_v2.0_unigene77898 SustainPine v2.0 390
AutoFact: Rab family GTPase n=1 Tax=Selaginella moellendorffii RepID=D8RPN0_SELML 5.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-related protein rab-18 1.022e-27
Putative N-terminus
sp_v2.0_unigene77914 SustainPine v2.0 519
AutoFact: GTPase Rab1 n=3 Tax=Pinaceae RepID=B0LXL9_9CONI 3.0e-14
FL-Next: tr=Rab1; Pinus pinaster (Maritime pine). 0.0
Blast2go: ras-related protein 6.45922e-15
Internal
sp_v2.0_unigene78203 SustainPine v2.0 240
AutoFact: RAB GTPase-C2A [Arabidopsis thaliana] ref|XP_002873100.1| predicted protein [Arabidopsis lyrata subsp. lyrata] sp|O49841.1|RAC2A_ARATH RecName: Full=Ras-related protein RABC2a; Short=AtRABC2a; AltName: Full=Ras-related protein Rab18B; Short=AtRab18B dbj|B 8.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-related protein rabc2a-like 3.06884e-43
Internal
sp_v2.0_unigene78304 SustainPine v2.0 372
AutoFact: Ras-related protein Rab11B n=1 Tax=Zea mays RepID=B6TX62_MAIZE 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-related protein raba1f-like 1.16448e-42
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain