Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Small GTPase superfamily, Rab type

Term: IPR003579  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene22794 SustainPine v2.0 1385
• AutoFact: Ras-related protein RABH1e n=4 Tax=Brassicaceae RepID=RAH1E_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rab6 -family small gtpase 0.0
Complete
sp_v2.0_unigene25253 SustainPine v2.0 1334
• AutoFact: Ras-related protein RABA1f n=29 Tax=Spermatophyta RepID=RAA1F_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gtp-binding protein 0.0
Complete
sp_v2.0_unigene25268 SustainPine v2.0 1539
• AutoFact: Ras-related protein RABH1e n=4 Tax=Brassicaceae RepID=RAH1E_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ras-related protein rabh1e-like 0.0
Complete
sp_v2.0_unigene26114 SustainPine v2.0 889
• AutoFact: Rab family GTPase n=3 Tax=Selaginella moellendorffii RepID=D8RE14_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rab family gtpase 0.0
N-terminus
sp_v2.0_unigene26184 SustainPine v2.0 2710
• AutoFact: Ras-related protein Rab11A n=5 Tax=Papilionoideae RepID=RB11A_LOTJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ras-related protein rab11a 0.0
Complete
sp_v2.0_unigene26217 SustainPine v2.0 1346
• AutoFact: Ras-related protein Rab11A n=5 Tax=Papilionoideae RepID=RB11A_LOTJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gtp-binding protein 0.0
Complete
sp_v2.0_unigene27079 SustainPine v2.0 1474
• AutoFact: Rab family GTPase n=1 Tax=Selaginella moellendorffii RepID=D8RRT7_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rab7 -family small gtpase 0.0
Complete
sp_v2.0_unigene27295 SustainPine v2.0 1900
• AutoFact: Rab family GTPase n=1 Tax=Selaginella moellendorffii RepID=D8SWR5_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gtp binding protein 0.0
Putative Complete
sp_v2.0_unigene27905 SustainPine v2.0 1466
• AutoFact: Rab2/RabB-family small GTPase n=4 Tax=Physcomitrella patens subsp. patens RepID=A9SC62_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rab2 -family small gtpase 0.0
Complete
sp_v2.0_unigene27968 SustainPine v2.0 816
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative N-terminus
sp_v2.0_unigene28353 SustainPine v2.0 1325
• AutoFact: Ras-related protein Rab7 n=11 Tax=core eudicotyledons RepID=RAB7_SOYBN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rab gtpase homolog g3a 0.0
Complete
sp_v2.0_unigene28416 SustainPine v2.0 1077
• AutoFact: WS0423.C21_M11 SS-NE-27 Picea sitchensis cDNA clone WS0423_M11 3', mRNA sequence. 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: thioredoxin family protein 0.0
C-terminus
sp_v2.0_unigene29954 SustainPine v2.0 1093
• AutoFact: Probable protein phosphatase 2C 59 n=5 Tax=Magnoliophyta RepID=P2C59_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein phosphatase 2c 0.0
Putative N-terminus
sp_v2.0_unigene31412 SustainPine v2.0 944
• AutoFact: Rab family GTPase n=3 Tax=Selaginella moellendorffii RepID=D8RE14_SELML 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rab family gtpase 2.9568e-40
N-terminus
sp_v2.0_unigene32776 SustainPine v2.0 1439
• AutoFact: Ras-related protein Rab11A n=5 Tax=Papilionoideae RepID=RB11A_LOTJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gtp-binding protein 0.0
Complete
sp_v2.0_unigene34393 SustainPine v2.0 501
• AutoFact: Rab family GTPase n=1 Tax=Selaginella moellendorffii RepID=D8RPN0_SELML 8.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ras-related protein rab-18 1.01631e-40
N-terminus
sp_v2.0_unigene45338 SustainPine v2.0 285
• AutoFact: Rab7 n=1 Tax=Pennisetum glaucum RepID=Q5MGQ9_PENAM 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ras-related protein rab7 0.0
Putative N-terminus
sp_v2.0_unigene46213 SustainPine v2.0 325
• AutoFact: RAB GTPase H1E [Arabidopsis thaliana] sp|Q9LFT9.1|RAH1E_ARATH RecName: Full=Ras-related protein RABH1e; Short=AtRABH1e emb|CAB96682.1| GTP-binding protein [Arabidopsis thaliana] gb|AED91514.1| RAB GTPase H1E [Arabidopsis thaliana] 3.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rab-like protein 0.0
Internal
sp_v2.0_unigene55310 SustainPine v2.0 890
• AutoFact: putative GTP-binding protein [Gossypium hirsutum] 4.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gtp-binding protein 1.52349e-22
Putative Complete
sp_v2.0_unigene60292 SustainPine v2.0 1279
• AutoFact: Ras-related protein RIC1 n=7 Tax=commelinids RepID=RIC1_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rab family gtpase 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain