Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: SNF2-related

Term: IPR000330  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene37675 SustainPine v2.0 741
AutoFact: DNA/RNA helicase protein RAD5 [Arabidopsis thaliana] sp|Q9FNI6.1|SM3L2_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Short=SMARCA3-like protein 2 dbj|BAB11681.1| DNA repa 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swi snf-related matrix-associated actin-dependent regulator of chromatin subfamily a member 3-like 2-like 0.0
Internal
sp_v2.0_unigene37941 SustainPine v2.0 361
AutoFact: SNF2 family DNA-dependent ATPase (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9TI22_PHYPA 5.0e-34
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: snf2 family dna-dependent atpase 1.11363e-33
Internal
sp_v2.0_unigene37963 SustainPine v2.0 467
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q9M1I1.1|FB304_ARATH RecName: Full=F-box protein At3g54460 emb|CAB77566.1| RING finger-like protein [Arabidopsis thaliana] gb|AAM13867.1| unknown protein [Arabidopsis thaliana] gb|AAO42330.1| unknown protein [Arabid 0.0
FL-Next: sp=F-box protein At3g54460; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein at3g54460-like 0.0
Internal
sp_v2.0_unigene38083 SustainPine v2.0 491
AutoFact: Transcription-coupled repair protein CSB/RAD26 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SCT4_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna repair and recombination protein 0.0
Internal
sp_v2.0_unigene38100 SustainPine v2.0 665
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9H8P5_POPTR 0.0
FL-Next: Isoform 2 of ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM 0.0
Blast2go: dna repair and recombination protein 0.0
Internal
sp_v2.0_unigene38500 SustainPine v2.0 520
AutoFact: DNA/RNA helicase protein RAD5 [Arabidopsis thaliana] sp|Q9FNI6.1|SM3L2_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Short=SMARCA3-like protein 2 dbj|BAB11681.1| DNA repa 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swi snf-related matrix-associated actin-dependent regulator of chromatin subfamily a member 3-like 2-like 0.0
Internal
sp_v2.0_unigene38616 SustainPine v2.0 572
AutoFact: Chromatin remodeling complex subunit (Fragment) n=1 Tax=Populus trichocarpa RepID=B9I5Q4_POPTR 4.0e-12
FL-Next: tr=Putative uncharacterized protein; subsp. trichocarpa). 0.0
Blast2go: dead-like helicase domain-containing protein 4.66195e-14
N-terminus
sp_v2.0_unigene39128 SustainPine v2.0 445
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9N3S4_POPTR 8.00001e-41
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
sp_v2.0_unigene39756 SustainPine v2.0 519
AutoFact: CHD3-type chromatin-remodeling factor PICKLE [Arabidopsis thaliana] sp|Q9S775.1|PKL_ARATH RecName: Full=CHD3-type chromatin-remodeling factor PICKLE; AltName: Full=Protein GYMNOS gb|AAF07084.1|AF185578_1 GYMNOS/PICKLE [Arabidopsis thaliana] gb|AAF13875.1| 2.99878e-43
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
sp_v2.0_unigene39975 SustainPine v2.0 480
AutoFact: OsRad54 protein n=1 Tax=Oryza sativa Japonica Group RepID=A4PBL4_ORYSJ 0.0
FL-Next: sp=ATP-dependent DNA helicase DDM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rad54-like protein 0.0
Internal
sp_v2.0_unigene40445 SustainPine v2.0 217
AutoFact: Snf2 histone linker phd ring helicase, putative n=1 Tax=Ricinus communis RepID=B9S4G9_RICCO 2.0e-17
FL-Next: tr=Snf2 histone linker phd ring helicase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: e3 ubiquitin-protein ligase shprh-like 5.58193e-21
Internal
sp_v2.0_unigene41059 SustainPine v2.0 292
AutoFact: chromatin remodeling 5 [Arabidopsis thaliana] gb|AEC06230.1| chromatin remodeling 5 [Arabidopsis thaliana] 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: chromodomain-helicase-dna-binding protein 2-like 4.56641e-31
Internal
sp_v2.0_unigene41068 SustainPine v2.0 346
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_123.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7UBN9_VITVI 1.0e-28
FL-Next: sp=F-box protein At3g54460; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein at3g54460-like 1.06415e-31
Internal
sp_v2.0_unigene41249 SustainPine v2.0 196
AutoFact: SWR1 complex protein, SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2Y8_PHYPA 1.0e-30
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swr1 complex snf2 family dna-dependent atpase 2.22626e-36
Internal
sp_v2.0_unigene41304 SustainPine v2.0 532
AutoFact: SW2/SNF2 family-like protein n=1 Tax=Populus trichocarpa RepID=B9N1U6_POPTR 9.0e-35
FL-Next: tr=SW2/SNF2 family-like protein; subsp. trichocarpa). 0.0
Blast2go: e3 ubiquitin-protein ligase shprh-like 1.19853e-41
N-terminus
sp_v2.0_unigene41383 SustainPine v2.0 305
AutoFact: SNF2 family DNA-dependent ATPase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TJL1_PHYPA 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf2 family dna-dependent atpase 5.73387e-29
Internal
sp_v2.0_unigene42125 SustainPine v2.0 345
AutoFact: Chromatin remodeling complex subunit (Fragment) n=1 Tax=Populus trichocarpa RepID=B9MV63_POPTR 4.0e-28
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: chromatin remodeling complex subunit 8.76046e-33
Internal
sp_v2.0_unigene42419 SustainPine v2.0 277
AutoFact: PREDICTED: similar to PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1); ATP binding / DNA binding / helicase n=1 Tax=Vitis vinifera RepID=UPI0001983E18 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: swr1 complex snf2 family dna-dependent atpase 1.49893e-29
Internal
sp_v2.0_unigene42574 SustainPine v2.0 374
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9GVF7_POPTR 2.0e-28
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 3.7229e-33
Internal
sp_v2.0_unigene42655 SustainPine v2.0 311
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9T6H9_RICCO 1.0e-28
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 7.98563e-31
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain