Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: SNF2-related

Term: IPR000330  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene8720 SustainPine v2.0 931
AutoFact: ATPase splayed [Arabidopsis thaliana] gb|AEC08101.1| ATPase splayed [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atpase splayed 0.0
Putative N-terminus
sp_v2.0_unigene8756 SustainPine v2.0 3811
AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent helicase brm-like 0.0
Putative Complete
sp_v2.0_unigene8865 SustainPine v2.0 722
AutoFact: SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TTS1_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromodomain-helicase-dna-binding protein 2-like 0.0
Putative N-terminus
sp_v2.0_unigene9125 SustainPine v2.0 1088
AutoFact: PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI0001983C0B 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: helicase-like transcription factor-like protein 0.0
Putative N-terminus
sp_v2.0_unigene10364 SustainPine v2.0 815
AutoFact: human Mi-2 autoantigen-like protein [Arabidopsis thaliana] dbj|BAB08833.1| helicase-like protein [Arabidopsis thaliana] 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 3.53322e-32
Putative N-terminus
sp_v2.0_unigene10412 SustainPine v2.0 933
AutoFact: putative AP2/EREBP transcription factor [Arabidopsis thaliana] 2.0e-16
FL-Next: tr=DREB protein; Taxus cuspidata (Japanese yew). 0.0
Blast2go: ap2 erf domain-containing transcription factor 8.11769e-19
N-terminus
sp_v2.0_unigene10497 SustainPine v2.0 1141
AutoFact: [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: chromodomain-helicase-dna-binding protein 2-like 0.0
Internal
sp_v2.0_unigene11617 SustainPine v2.0 759
AutoFact: Chromatin remodelling complex ATPase chain isw-1, putative n=1 Tax=Ricinus communis RepID=B9S022_RICCO 8.0e-30
FL-Next: tr=Chromatin remodelling complex ATPase chain isw-1, putative; Ricinus communis (Castor bean). 0.0
Blast2go: chromatin remodelling complex atpase chain isw- 3.6255e-33
C-terminus
sp_v2.0_unigene12191 SustainPine v2.0 973
AutoFact: DUF3535 domain containing protein 0.0001
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: tata box binding protein associated factor-like protein 0.0
Internal
sp_v2.0_unigene12279 SustainPine v2.0 309
AutoFact: DUF3535 domain containing protein 4.0e-12
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: tata-binding protein-associated factor 2.265e-24
Internal
sp_v2.0_unigene12542 SustainPine v2.0 637
AutoFact: SWR1 complex protein, SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2Y8_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swr1 complex snf2 family dna-dependent atpase 0.0
Putative C-terminus
sp_v2.0_unigene13536 SustainPine v2.0 456
AutoFact: chromatin remodeling factor18 [Arabidopsis thaliana] gb|AEE32273.1| chromatin remodeling factor18 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: chromatin remodelling complex atpase chain isw- 0.0
Internal
sp_v2.0_unigene13819 SustainPine v2.0 812
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9GWX1_POPTR 0.0
FL-Next: sp=F-box protein At3g54460; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein at3g54460-like 0.0
Internal
sp_v2.0_unigene14964 SustainPine v2.0 723
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: atpase splayed 1.11173e-30
N-terminus
sp_v2.0_unigene16409 SustainPine v2.0 1762
AutoFact: Caldesmon multi-domain protein 7.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxilin-related protein 2-like 0.0
Complete
sp_v2.0_unigene18573 SustainPine v2.0 1641
AutoFact: putative AP2/EREBP transcription factor [Arabidopsis thaliana] 1.0e-23
FL-Next: sp=Ethylene-responsive transcription factor ABI4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ap2 erf domain-containing transcription factor 0.0
Complete
sp_v2.0_unigene18670 SustainPine v2.0 609
AutoFact: putative DNA repair protein rhp54 [Oryza sativa Japonica Group] 8.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rad54-like protein 0.0
C-terminus
sp_v2.0_unigene18757 SustainPine v2.0 414
AutoFact: RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein n=1 Tax=Arabidopsis thaliana RepID=F4II36_ARATH 2.0e-27
FL-Next: tr=RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: snf2 super family 2.49511e-31
Internal
sp_v2.0_unigene19683 SustainPine v2.0 327
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q9M1I1.1|FB304_ARATH RecName: Full=F-box protein At3g54460 emb|CAB77566.1| RING finger-like protein [Arabidopsis thaliana] gb|AAM13867.1| unknown protein [Arabidopsis thaliana] gb|AAO42330.1| unknown protein [Arabid 2.0e-27
FL-Next: sp=F-box protein At3g54460; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein at3g54460-like 1.71758e-37
Internal
sp_v2.0_unigene20032 SustainPine v2.0 909
AutoFact: DNA helicase INO80 complex-like 1 [Arabidopsis thaliana] sp|Q8RXS6.2|INO80_ARATH RecName: Full=DNA helicase INO80; Short=AtINO80; AltName: Full=Putative DNA helicase INO80 complex homolog 1 gb|AEE79637.1| DNA helicase INO80 complex-like 1 [Arabidopsis tha 0.0
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain