Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Intermediate filament protein, conserved site

Term: IPR018039  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene454 SustainPine v2.0 2692
AutoFact: DUF593 multi-domain protein 7.00649e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100796290 3.9965e-42
Putative Complete
sp_v2.0_unigene3117 SustainPine v2.0 1392
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 42-like 0.0
C-terminus
sp_v2.0_unigene3198 SustainPine v2.0 2764
AutoFact: DEAD box protein P68 [Pisum sativum] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene3545 SustainPine v2.0 2422
AutoFact: Fyve finger-containing phosphoinositide kinase, fyv1, putative n=1 Tax=Ricinus communis RepID=B9T3Y2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fyve finger-containing phosphoinositide 0.0
Putative Complete
sp_v2.0_unigene4239 SustainPine v2.0 2470
AutoFact: DEAD-box ATP-dependent RNA helicase 40 [Arabidopsis thaliana] sp|Q9SQV1.1|RH40_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 40 gb|AAF08584.1|AC011623_17 putative RNA helicase [Arabidopsis thaliana] gb|AEE74400.1| DEAD-box ATP-dependent RNA heli 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 14 0.0
C-terminus
sp_v2.0_unigene5764 SustainPine v2.0 413
AutoFact: DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana] sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24 gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana] gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 24 0.0
Internal
sp_v2.0_unigene6368 SustainPine v2.0 321
AutoFact: 1-phosphatidylinositol-3-phosphate 5-kinase-like [Oryza sativa Japonica Group] 6.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 1-phosphatidylinositol-3-phosphate 5-kinase-like 0.0
Internal
sp_v2.0_unigene6457 SustainPine v2.0 1471
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SSI9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gdsl esterase lipase 0.0
Complete
sp_v2.0_unigene8760 SustainPine v2.0 1507
AutoFact: transcription elongation regulator 1 [Arabidopsis thaliana] dbj|BAB01298.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76298.1| transcription elongation regulator 1 [Arabidopsis thaliana] 7.0e-40
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: transcription elongation regulator 1-like 0.0
C-terminus
sp_v2.0_unigene11405 SustainPine v2.0 1760
AutoFact: SUMO protease [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sumo protease 0.0
Complete
sp_v2.0_unigene12435 SustainPine v2.0 1598
AutoFact: Putative 9-cis-epoxycarotenoid dioxygenase n=9 Tax=Cupressaceae RepID=Q0EEH1_TAXDI 0.0
FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Taxodium distichum (Bald cypress) (Cupressus disticha). 0.0
Blast2go: 9-cis-epoxycarotenoid dioxygenase 0.0
N-terminus
sp_v2.0_unigene12644 SustainPine v2.0 825
AutoFact: transcription elongation regulator 1 [Arabidopsis thaliana] dbj|BAB01298.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76298.1| transcription elongation regulator 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transcription elongation regulator 1-like 0.0
Internal
sp_v2.0_unigene12649 SustainPine v2.0 457
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gdsl esterase lipase exl3-like 2.29858e-34
Putative N-terminus
sp_v2.0_unigene13919 SustainPine v2.0 1359
AutoFact: Galactinol synthase n=1 Tax=Coffea arabica RepID=E0X627_COFAR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: galactinol synthase 0.0
Complete
sp_v2.0_unigene14250 SustainPine v2.0 857
AutoFact: 1-phosphatidylinositol-3-phosphate 5-kinase [Arabidopsis thaliana] dbj|BAE99133.1| hypothetical protein [Arabidopsis thaliana] gb|AEE86194.1| 1-phosphatidylinositol-3-phosphate 5-kinase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 1-phosphatidylinositol-3-phosphate 5-kinase 0.0
C-terminus
sp_v2.0_unigene18117 SustainPine v2.0 783
AutoFact: galactinol synthase 2 [Arabidopsis thaliana] gb|AAG09103.1|AC009323_14 Putative galactinol synthase [Arabidopsis thaliana] gb|AAK91426.1| At1g56600/F25P12_16 [Arabidopsis thaliana] gb|AAL15412.1| At1g56600/F25P12_16 [Arabidopsis thaliana] dbj|BAB78531.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: galactinol synthase 0.0
C-terminus
sp_v2.0_unigene20302 SustainPine v2.0 1007
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 42-like 0.0
Putative N-terminus
sp_v2.0_unigene21171 SustainPine v2.0 631
AutoFact: Galactinol synthase n=3 Tax=Brassica napus RepID=B6ZBV9_BRANA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: galactinol synthase 0.0
C-terminus
sp_v2.0_unigene23423 SustainPine v2.0 1290
AutoFact: DEAD-box ATP-dependent RNA helicase 40 [Arabidopsis thaliana] sp|Q9SQV1.1|RH40_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 40 gb|AAF08584.1|AC011623_17 putative RNA helicase [Arabidopsis thaliana] gb|AEE74400.1| DEAD-box ATP-dependent RNA heli 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 14 0.0
Putative C-terminus
sp_v2.0_unigene24697 SustainPine v2.0 882
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain