Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Signal recognition particle, SRP54 subunit, GTPase

Term: IPR000897  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene11793 SustainPine v2.0 616
AutoFact: ERF protein n=1 Tax=Glycine max RepID=D9IXB2_SOYBN 6.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transcription factor 5-like 0.0
Putative C-terminus
sp_v2.0_unigene12191 SustainPine v2.0 973
AutoFact: DUF3535 domain containing protein 0.0001
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: tata box binding protein associated factor-like protein 0.0
Internal
sp_v2.0_unigene12279 SustainPine v2.0 309
AutoFact: DUF3535 domain containing protein 4.0e-12
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: tata-binding protein-associated factor 2.265e-24
Internal
sp_v2.0_unigene12478 SustainPine v2.0 1937
AutoFact: Phosphatidylinositol 3-and 4-kinase, catalytic n=1 Tax=Medicago truncatula RepID=A2Q630_MEDTR 0.0
FL-Next: sp=Probable phosphatidylinositol 4-kinase type 2-beta At1g26270; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: phosphatidylinositol 3-and 4-kinase family protein 0.0
C-terminus
sp_v2.0_unigene14530 SustainPine v2.0 564
AutoFact: Ethylene responsive element binding protein C4 n=2 Tax=Capsicum annuum RepID=Q32W72_CAPAN 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: erf2 transcription factor 4.4167e-40
C-terminus
sp_v2.0_unigene18552 SustainPine v2.0 2963
AutoFact: serine protease-like protein [Nicotiana tabacum] 0.0
FL-Next: tr=Subtilisin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: subtilisin-like protease-like 0.0
C-terminus
sp_v2.0_unigene20235 SustainPine v2.0 350
AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=B9NBC4_POPTR 1.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: erf2 transcription factor 6.82463e-26
Internal
sp_v2.0_unigene22017 SustainPine v2.0 401
AutoFact: ERF transcription factor n=1 Tax=Solanum tuberosum RepID=A4ZX83_SOLTU 5.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: erf transcription factor 0.0
Internal
sp_v2.0_unigene22399 SustainPine v2.0 1089
AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=B9N9M4_POPTR 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transcription 9.43294e-22
Putative C-terminus
sp_v2.0_unigene25415 SustainPine v2.0 1352
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9I6D4_POPTR 0.0
FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
Blast2go: tata-binding protein-associated factor 172-like 0.0
N-terminus
sp_v2.0_unigene25792 SustainPine v2.0 524
AutoFact: putative valyl-tRNA synthetase [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Valyl-tRNA synthetase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: valyl-trna synthetase-like 0.0
Internal
sp_v2.0_unigene25903 SustainPine v2.0 2563
AutoFact: Cucumisin, putative n=1 Tax=Ricinus communis RepID=B9SRB6_RICCO 0.0
FL-Next: tr=Subtilisin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: subtilisin-like protease-like 0.0
C-terminus
sp_v2.0_unigene26239 SustainPine v2.0 1634
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9I6D4_POPTR 0.0
FL-Next: sp=ATP-dependent DNA helicase DDM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: tata box binding protein associated factor-like protein 0.0
Putative N-terminus
sp_v2.0_unigene26702 SustainPine v2.0 678
AutoFact: putative AP2-related transcription factor [Oryza sativa] 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transcription factor 2 1.62046e-41
C-terminus
sp_v2.0_unigene27775 SustainPine v2.0 645
AutoFact: Xylem serine proteinase 1, putative n=1 Tax=Ricinus communis RepID=B9RHC5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene27804 SustainPine v2.0 1774
AutoFact: TATA box binding protein (TBP) associated factor (TAF)-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tata-binding protein-associated factor 0.0
Putative C-terminus
sp_v2.0_unigene28850 SustainPine v2.0 1182
AutoFact: Ethylene responsive element binding protein 1 n=1 Tax=Gossypium barbadense RepID=A3FMG9_GOSBA 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transcription factor 1a 0.0
Complete
sp_v2.0_unigene29309 SustainPine v2.0 539
AutoFact: chloroplast srp54 receptor1 [Zea mays] emb|CAD70570.1| chloroplast SRP receptor cpFtsY precursor [Zea mays] gb|ACR34281.1| unknown [Zea mays] 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: signal recognition 54 kda protein 3.93765e-43
Putative Complete
sp_v2.0_unigene29569 SustainPine v2.0 1627
AutoFact: Subtilisin-like proteinase-like n=3 Tax=Oryza sativa RepID=Q9AX30_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: subtilase family protein 0.0
N-terminus
sp_v2.0_unigene29621 SustainPine v2.0 1151
AutoFact: Ethylene-responsive transcription factor 1A n=1 Tax=Medicago truncatula RepID=A9P6A4_MEDTR 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transcription factor 1a 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain