Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Flagellar basal body rod protein, conserved site

Term: IPR019776  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene2245 SustainPine v2.0 1717
AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 0.0
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Blast2go: gras family transcription factor 0.0
C-terminus
sp_v2.0_unigene3953 SustainPine v2.0 1523
AutoFact: Phytochrome n=43 Tax=Spermatophyta RepID=PHY_PINSY 0.0
FL-Next: sp=Phytochrome; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phytochrome p 0.0
Putative N-terminus
sp_v2.0_unigene8312 SustainPine v2.0 2363
AutoFact: Phytochrome n=1 Tax=Marchantia paleacea var. diptera RepID=Q9AVP3_MARPA 0.0
FL-Next: sp=Phytochrome; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phytochrome 0.0
C-terminus
sp_v2.0_unigene8616 SustainPine v2.0 655
AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome 0.0
Internal
sp_v2.0_unigene15181 SustainPine v2.0 907
AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 0.0
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Blast2go: protein scarecrow-like 0.0
C-terminus
sp_v2.0_unigene19183 SustainPine v2.0 522
AutoFact: Phytochrome (Fragment) n=1 Tax=Pseudotsuga menziesii RepID=Q40917_PSEMZ 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome p 0.0
Internal
sp_v2.0_unigene27968 SustainPine v2.0 816
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
sp_v2.0_unigene28416 SustainPine v2.0 1077
AutoFact: WS0423.C21_M11 SS-NE-27 Picea sitchensis cDNA clone WS0423_M11 3', mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thioredoxin family protein 0.0
C-terminus
sp_v2.0_unigene43331 SustainPine v2.0 171
AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 9.0e-20
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome p 8.16454e-20
Internal
sp_v2.0_unigene43600 SustainPine v2.0 396
AutoFact: Phytochrome P (Fragment) n=1 Tax=Pinus kwangtungensis var. kwangtungensis RepID=F2Q6G9_9CONI 9.94922e-44
FL-Next: sp=Phytochrome; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phytochrome p 0.0
Internal
sp_v2.0_unigene58207 SustainPine v2.0 370
AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 1.0e-35
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Blast2go: gras family transcription factor 2.38193e-41
C-terminus
sp_v2.0_unigene69249 SustainPine v2.0 203
AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 6.0e-27
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Blast2go: gras family transcription factor 4.95521e-32
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain