Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Transcription factor TFIIB

Term: IPR000812  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene418 SustainPine v2.0 2450
AutoFact: Hexokinase n=1 Tax=Citrus sinensis RepID=Q9FVD3_CITSI 0.0
FL-Next: sp=Hexokinase-1; Spinacia oleracea (Spinach). 0.0
Blast2go: hexokinase 1 0.0
Complete
sp_v2.0_unigene867 SustainPine v2.0 2420
AutoFact: AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_850215.1| AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_973590.1| AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_001118437.1| AT hook m 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at hook motif dna-binding family protein 0.0
Complete
sp_v2.0_unigene1367 SustainPine v2.0 2523
AutoFact: putative AT-hook DNA-binding protein [Oryza sativa Japonica Group] gb|EAZ07603.1| hypothetical protein OsI_29854 [Oryza sativa Indica Group] 5.60519e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Complete
sp_v2.0_unigene3209 SustainPine v2.0 1924
AutoFact: Hexokinase 6 n=1 Tax=Nicotiana tabacum RepID=Q6Q8A0_TOBAC 0.0
FL-Next: sp=Hexokinase-3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: hexokinase 0.0
Complete
sp_v2.0_unigene6734 SustainPine v2.0 1580
AutoFact: AT-hook DNA-binding protein [Gossypium hirsutum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Complete
sp_v2.0_unigene12881 SustainPine v2.0 194
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v2.0_unigene14624 SustainPine v2.0 1641
AutoFact: transcription initiation factor IIB-2 [Arabidopsis thaliana] sp|Q9SS44.1|TF2B2_ARATH RecName: Full=Transcription initiation factor IIB-2; AltName: Full=General transcription factor TFIIB-2; Short=AtTFIIB2 gb|AAF02810.1|AC009400_6 transcription initiation 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription initiation factor iib 0.0
Complete
sp_v2.0_unigene18454 SustainPine v2.0 1966
AutoFact: AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_850215.1| AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_973590.1| AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_001118437.1| AT hook m 9.94922e-44
FL-Next: sp=Putative DNA-binding protein ESCAROLA; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: at hook motif dna-binding family protein 0.0
Complete
sp_v2.0_unigene22345 SustainPine v2.0 2129
AutoFact: AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_850215.1| AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_973590.1| AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_001118437.1| AT hook m 8.40779e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at hook motif dna-binding family protein 0.0
Complete
sp_v2.0_unigene23384 SustainPine v2.0 2108
AutoFact: Transcription initiation factor IIB n=7 Tax=Poaceae RepID=TF2B_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription initiation factor iib 0.0
Complete
sp_v2.0_unigene25356 SustainPine v2.0 2195
AutoFact: Hexokinase n=1 Tax=Citrus sinensis RepID=Q9FVD3_CITSI 0.0
FL-Next: sp=Hexokinase-1; Spinacia oleracea (Spinach). 0.0
Blast2go: hexokinase 1 0.0
Complete
sp_v2.0_unigene25861 SustainPine v2.0 2301
AutoFact: putative AT-hook DNA-binding protein [Oryza sativa Japonica Group] gb|EAZ07603.1| hypothetical protein OsI_29854 [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Complete
sp_v2.0_unigene27155 SustainPine v2.0 1603
AutoFact: RecName: Full=Transcription initiation factor IIB; AltName: Full=General transcription factor TFIIB gb|AAB09756.1| transcription factor TFIIB [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription initiation factor iib 0.0
Complete
sp_v2.0_unigene30391 SustainPine v2.0 1603
AutoFact: receptor-like protein kinase homolog RK20-1 [Phaseolus vulgaris] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cysteine-rich receptor-like protein kinase 0.0
Internal
sp_v2.0_unigene38463 SustainPine v2.0 522
AutoFact: TFIIB-related protein (Fragment) n=1 Tax=Spinacia oleracea RepID=Q93YB0_SPIOL 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transcription initiation factor like protein 0.0
Internal
sp_v2.0_unigene41226 SustainPine v2.0 211
AutoFact: transcription factor IIB (ISS) [Ostreococcus tauri] emb|CAL56498.1| transcription factor IIB (ISS) [Ostreococcus tauri] 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 3.73771e-37
Internal
sp_v2.0_unigene41593 SustainPine v2.0 322
AutoFact: WS0287.B21_H05 SS-IB-A-FL-13 Picea sitchensis cDNA clone WS0287_H05 5, mRNA sequence. 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor iiib 90 kda subunit-like 2.30303e-23
N-terminus
sp_v2.0_unigene46686 SustainPine v2.0 292
AutoFact: TFIIB-related protein (Fragment) n=2 Tax=Andropogoneae RepID=Q93WQ2_MAIZE 1.0e-36
FL-Next: tr=TFIIB-related protein, putative, expressed; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: transcription initiation factor iib 2.56157e-36
Putative N-terminus
sp_v2.0_unigene47183 SustainPine v2.0 552
AutoFact: transcription factor IIB (ISS) [Ostreococcus tauri] emb|CAL56498.1| transcription factor IIB (ISS) [Ostreococcus tauri] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene49763 SustainPine v2.0 372
AutoFact: receptor-like protein kinase like protein [Arabidopsis thaliana] 6.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.64296e-21
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain