Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Histone-fold

Term: IPR009072  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene34106 SustainPine v2.0 476
AutoFact: transcription initiation factor IID (TFIID) subunit A-like protein [Oryza sativa Japonica Group] 4.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tata-associated factor ii 58 4.2225e-21
Complete
sp_v2.0_unigene34279 SustainPine v2.0 762
AutoFact: histone H4 [Hyacinthus orientalis] 4.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Complete
sp_v2.0_unigene35501 SustainPine v2.0 938
AutoFact: transcription initiation factor TFIID subunit D7 [Arabidopsis thaliana] gb|AAD25788.1|AC006577_24 Similar to gb|U21858 transcription initiation factor TFIID 31KD subunit (TAFII32) from Homo sapiens [Arabidopsis thaliana] gb|AAF65406.1|AF238327_1 putative 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription initiation factor tfiid subunit 0.0
Complete
sp_v2.0_unigene36369 SustainPine v2.0 586
AutoFact: histone H4 [Theileria parva strain Muguga] ref|XP_764313.1| histone H4 [Theileria parva strain Muguga] ref|XP_953319.1| histone H4 [Theileria annulata strain Ankara] ref|XP_953321.1| histone H4 [Theileria annulata strain Ankara] emb|CAI76694.1| histone H4 3.0e-20
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 3.54752e-20
Putative Complete
sp_v2.0_unigene36575 SustainPine v2.0 958
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 1.99993e-41
FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h2b like protein 0.0
Putative Complete
sp_v2.0_unigene36986 SustainPine v2.0 368
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 1.0e-16
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 2.8668e-16
Putative N-terminus
sp_v2.0_unigene37801 SustainPine v2.0 264
AutoFact: Queuine tRNA-ribosyltransferase (Fragment) n=3 Tax=rosids RepID=E0CRP9_VITVI 3.0e-39
FL-Next: sp=Queuine tRNA-ribosyltransferase; Vitis vinifera (Grape). 0.0
Blast2go: queuine trna-ribosyltransferase 0.0
Internal
sp_v2.0_unigene37936 SustainPine v2.0 566
AutoFact: Queuine tRNA-ribosyltransferase n=4 Tax=Poaceae RepID=Q6K4A3_ORYSJ 0.0
FL-Next: sp=Queuine tRNA-ribosyltransferase; Zea mays (Maize). 0.0
Blast2go: queuine trna-ribosyltransferase 0.0
N-terminus
sp_v2.0_unigene40691 SustainPine v2.0 194
AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ricinus communis RepID=B9SWA7_RICCO 4.0e-26
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin carboxyl-terminal 1.42402e-32
Internal
sp_v2.0_unigene41928 SustainPine v2.0 783
AutoFact: histone H4 [Hyacinthus orientalis] 4.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Complete
sp_v2.0_unigene43242 SustainPine v2.0 379
AutoFact: nuclear transcription factor Y subunit B-2 [Arabidopsis thaliana] sp|Q9FGJ3.1|NFYB2_ARATH RecName: Full=Nuclear transcription factor Y subunit B-2; Short=AtNF-YB-2; AltName: Full=Transcriptional activator HAP3B gb|AAK60334.1|AF385744_1 AT5g47640/MNJ7_23 [ 5.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene44599 SustainPine v2.0 313
AutoFact: nuclear factor Y, subunit C11 [Arabidopsis thaliana] gb|AAL58929.1|AF462841_1 At3g12480/MQC3.32 [Arabidopsis thaliana] dbj|BAB03155.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28786.1| At3g12480/MQC3.32 [Arabidopsis thaliana] gb|AEE75200.1| nu 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: negative cofactor 2 transcriptional co- 3.4013e-09
Putative N-terminus
sp_v2.0_unigene46779 SustainPine v2.0 577
AutoFact: Histone H4 n=1 Tax=Ostreococcus tauri RepID=Q01FF9_OSTTA 2.0e-06
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 2.33244e-08
C-terminus
sp_v2.0_unigene60063 SustainPine v2.0 477
AutoFact: PREDICTED: histone H3.2-like n=1 Tax=Monodelphis domestica RepID=UPI00020F6110 3.0e-11
FL-Next: tr=Histone 3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: his3 8.24538e-15
C-terminus
sp_v2.0_unigene60295 SustainPine v2.0 888
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2 0.0
Complete
sp_v2.0_unigene60404 SustainPine v2.0 817
AutoFact: PREDICTED: histone H3.2-like n=1 Tax=Danio rerio RepID=UPI0001CF207B 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h3 0.0
Complete
sp_v2.0_unigene60458 SustainPine v2.0 860
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h2b 0.0
Complete
sp_v2.0_unigene60472 SustainPine v2.0 828
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 0.0
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone 2 0.0
Complete
sp_v2.0_unigene60655 SustainPine v2.0 753
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 4.99983e-42
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 0.0
Complete
sp_v2.0_unigene60664 SustainPine v2.0 422
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9P2K6_PICSI 2.0e-13
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 9.0643e-17
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain