Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Histone-fold

Term: IPR009072  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene80242 SustainPine v2.0 601
AutoFact: Histone H2AX n=10 Tax=rosids RepID=H2AX_CICAR 3.0e-13
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 1.90068e-14
Complete
sp_v2.0_unigene80401 SustainPine v2.0 486
AutoFact: Histone H3 (Fragment) n=10 Tax=Glycine RepID=Q9FVB2_GLYTA 1.0e-09
FL-Next: tr=Histone 3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h3-d 1.76315e-12
Putative C-terminus
sp_v2.0_unigene80414 SustainPine v2.0 407
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 7.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b like protein 0.0
C-terminus
sp_v2.0_unigene80801 SustainPine v2.0 443
AutoFact: histone H4 [Hyacinthus orientalis] 7.0e-17
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h4 1.22608e-17
Putative Complete
sp_v2.0_unigene80819 SustainPine v2.0 1146
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 7.0e-25
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 8.98131e-30
Complete
sp_v2.0_unigene80872 SustainPine v2.0 207
AutoFact: Unassigned protein
Coding
sp_v2.0_unigene81093 SustainPine v2.0 523
AutoFact: GF20391 n=4 Tax=Coelomata RepID=B3N2H1_DROAN 9.0e-36
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Complete
sp_v2.0_unigene81295 SustainPine v2.0 504
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NTX3_PICSI 3.0e-21
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 6.23127e-21
Putative Complete
sp_v2.0_unigene81314 SustainPine v2.0 608
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 4.0e-27
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 6.30032e-34
Complete
sp_v2.0_unigene81589 SustainPine v2.0 729
AutoFact: RecName: Full=Histone H4 type VIII pdb|2HIO|D Chain D, Histone Octamer (Chicken), Chromosomal Protein gb|AAC60002.1| histone H4-VIII [Gallus gallus] 1.0e-32
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h4 3.85497e-41
Complete
sp_v2.0_unigene82131 SustainPine v2.0 620
AutoFact: Histone H3 n=3 Tax=Eukaryota RepID=B6SJQ5_MAIZE 0.0
FL-Next: tr=Histone 3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h3 0.0
N-terminus
sp_v2.0_unigene82192 SustainPine v2.0 510
AutoFact: histone H4 [Hyacinthus orientalis] 1.0e-32
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 4.962e-42
Complete
sp_v2.0_unigene82196 SustainPine v2.0 779
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 1.00053e-42
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 0.0
Complete
sp_v2.0_unigene82257 SustainPine v2.0 451
AutoFact: histone H4 [Hyacinthus orientalis] 9.0e-39
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Complete
sp_v2.0_unigene82260 SustainPine v2.0 409
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 2.0e-31
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a variant 2.03285e-40
C-terminus
sp_v2.0_unigene82291 SustainPine v2.0 379
AutoFact: histone H3 [Arabidopsis thaliana] gb|AEE87156.1| histone H3 [Arabidopsis thaliana] 1.0e-27
FL-Next: tr=Histone 3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h3 2.8137e-35
N-terminus
sp_v2.0_unigene82404 SustainPine v2.0 483
AutoFact: histone H4 [Hyacinthus orientalis] 1.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Complete
sp_v2.0_unigene82455 SustainPine v2.0 693
AutoFact: Histone H3 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TNQ7_PHYPA 3.0e-30
FL-Next: tr=Histone H3; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: histone h3 2.52715e-38
Complete
sp_v2.0_unigene82498 SustainPine v2.0 480
AutoFact: histone H4 [Arabidopsis thaliana] ref|XP_002284162.1| PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] ref|XP_002284573.1| PREDICTED: hypothetical protein isoform 3 [Vitis vinifera] ref|XP_002262866.1| PREDICTED: hypothetical protein isoform 2 [ 9.0e-29
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 4.86088e-37
Putative Complete
sp_v2.0_unigene82544 SustainPine v2.0 528
AutoFact: Histone H3 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TNQ7_PHYPA 0.0
FL-Next: tr=Histone 3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h3 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain