Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Histone-fold

Term: IPR009072  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene60793 SustainPine v2.0 686
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9P2K6_PICSI 8.0e-23
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 3.38063e-28
Putative N-terminus
sp_v2.0_unigene60901 SustainPine v2.0 768
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
Complete
sp_v2.0_unigene60979 SustainPine v2.0 685
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 9.99967e-42
FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h2b 0.0
Complete
sp_v2.0_unigene61052 SustainPine v2.0 626
AutoFact: Histone H2B (Fragment) n=1 Tax=Asparagus officinalis RepID=Q43724_ASPOF 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 9.35927e-42
C-terminus
sp_v2.0_unigene61171 SustainPine v2.0 921
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 3.0e-35
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 1.55544e-43
Complete
sp_v2.0_unigene61261 SustainPine v2.0 904
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 7.0e-34
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a-like protein 6.44597e-44
Complete
sp_v2.0_unigene61498 SustainPine v2.0 880
AutoFact: Ccaat-binding transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RHZ1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transcription factor y subunit c-9 0.0
C-terminus
sp_v2.0_unigene61724 SustainPine v2.0 557
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b like protein 3.76597e-25
C-terminus
sp_v2.0_unigene62121 SustainPine v2.0 417
AutoFact: PREDICTED: histone H2A type 1-A-like n=2 Tax=Sus scrofa RepID=UPI0001E87492 2.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Complete
sp_v2.0_unigene62997 SustainPine v2.0 328
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 9.06721e-14
C-terminus
sp_v2.0_unigene63760 SustainPine v2.0 416
AutoFact: Histone H2A n=1 Tax=Sorghum bicolor RepID=C5YYL4_SORBI 2.0e-28
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 1.74626e-36
N-terminus
sp_v2.0_unigene64110 SustainPine v2.0 555
AutoFact: Histone H2A (Fragment) n=1 Tax=Hyacinthus orientalis RepID=Q5YJR4_HYAOR 4.0e-33
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a-like protein 1.97583e-43
Complete
sp_v2.0_unigene64230 SustainPine v2.0 474
AutoFact: Histone H2B.4 n=7 Tax=Arabidopsis RepID=H2B4_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
C-terminus
sp_v2.0_unigene64244 SustainPine v2.0 403
AutoFact: Histone H2B protein (Fragment) n=1 Tax=Pinus pinaster RepID=Q8VX93_PINPS 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2 2.53761e-41
C-terminus
sp_v2.0_unigene64590 SustainPine v2.0 459
AutoFact: CCAAT-binding transcription factor family protein n=1 Tax=Glycine max RepID=E0WC42_SOYBN 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transcription factor y subunit b-1 5.60519e-45
C-terminus
sp_v2.0_unigene65523 SustainPine v2.0 254
AutoFact: Unassigned protein
Coding
sp_v2.0_unigene66399 SustainPine v2.0 606
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 2.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
Putative Complete
sp_v2.0_unigene66823 SustainPine v2.0 366
AutoFact: Histone H2AX n=7 Tax=Spermatophyta RepID=H2AX_PICAB 1.0e-18
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone 7.09788e-24
Putative N-terminus
sp_v2.0_unigene67782 SustainPine v2.0 324
AutoFact: transcription initiation factor TFIID subunit D9 [Arabidopsis thaliana] gb|AAF65405.1|AF238326_1 putative TATA binding protein associated factor 24kDa subunit [Arabidopsis thaliana] gb|AAK43956.1|AF370141_1 unknown protein [Arabidopsis thaliana] gb|AAK937 1.0e-21
FL-Next: tr=Transcription initiation factor TFIID subunit, putative; Ricinus communis (Castor bean). 0.0
Blast2go: transcription initiation factor tfiid subunit 11 7.10642e-33
C-terminus
sp_v2.0_unigene69471 SustainPine v2.0 358
AutoFact: histone H4 [Hyacinthus orientalis] 5.0e-33
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 8.96831e-44
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain