Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Paired amphipathic helix

Term: IPR003822  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene28141 SustainPine v2.0 1308
AutoFact: [B] COG5602 Histone deacetylase complex, SIN3 component 9.0e-08
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
Internal
sp_v2.0_unigene28426 SustainPine v2.0 3517
AutoFact: transcriptional co-repressor -like [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Paired amphipathic helix protein Sin3-like 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
C-terminus
sp_v2.0_unigene28536 SustainPine v2.0 399
AutoFact: SIN3 component, histone deacetylase complex n=1 Tax=Populus trichocarpa RepID=B9HLV3_POPTR 4.2039e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sin3 histone deacetylase complex 4.2039e-45
C-terminus
sp_v2.0_unigene32839 SustainPine v2.0 585
AutoFact: putative mitogen-activated protein kinase 1 [Medicago sativa] 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitogen-activated protein kinase kinase kinase 1-like 6.14505e-35
Internal
sp_v2.0_unigene34708 SustainPine v2.0 500
AutoFact: [B] COG5602 Histone deacetylase complex, SIN3 component 5.0e-12
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: sin3 histone deacetylase complex 5.59615e-29
Internal
sp_v2.0_unigene36346 SustainPine v2.0 1130
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SKK6_RICCO 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable wrky transcription factor 12-like 4.36942e-17
Putative N-terminus
sp_v2.0_unigene39061 SustainPine v2.0 635
AutoFact: paired amphipathic helix protein Sin3-like 2 [Arabidopsis thaliana] sp|Q9LFQ3.2|SNL2_ARATH RecName: Full=Paired amphipathic helix protein Sin3-like 2 gb|AED92105.1| paired amphipathic helix protein Sin3-like 2 [Arabidopsis thaliana] 2.0e-14
FL-Next: sp=Paired amphipathic helix protein Sin3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: paired amphipathic helix protein sin3-like 4-like 6.56335e-22
N-terminus
sp_v2.0_unigene42966 SustainPine v2.0 506
AutoFact: WRKY domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJF7_MALDO 0.0
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: paired amphipathic helix protein sin3 0.0
Internal
sp_v2.0_unigene49563 SustainPine v2.0 528
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RIV9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 0.0
Internal
sp_v2.0_unigene65802 SustainPine v2.0 426
AutoFact: NPK1-related protein kinase-like protein [Zea mays] 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene66178 SustainPine v2.0 315
AutoFact: transcriptional co-repressor -like [Oryza sativa Japonica Group] 9.0e-27
FL-Next: sp=Paired amphipathic helix protein Sin3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone deacetylase sin3 component 1.20971e-38
Internal
sp_v2.0_unigene81490 SustainPine v2.0 619
AutoFact: Putative histone deacetylase complex, SIN3 component (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T7L8_PHYPA 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v2.0_unigene82352 SustainPine v2.0 345
AutoFact: paired amphipathic helix protein Sin3-like 2 [Arabidopsis thaliana] sp|Q9LFQ3.2|SNL2_ARATH RecName: Full=Paired amphipathic helix protein Sin3-like 2 gb|AED92105.1| paired amphipathic helix protein Sin3-like 2 [Arabidopsis thaliana] 7.0e-18
FL-Next: sp=Paired amphipathic helix protein Sin3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: paired amphipathic helix protein sin3-like 2 7.39851e-22
Internal
sp_v2.0_unigene84884 SustainPine v2.0 662
AutoFact: transcriptional co-repressor -like [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
Internal
sp_v2.0_unigene91702 SustainPine v2.0 442
AutoFact: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative n=1 Tax=Ricinus communis RepID=B9RTY0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain