Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Tubulin, conserved site

Term: IPR017975  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene25108 SustainPine v2.0 683
AutoFact: putative DEAD/H box polypeptide 36 protein [Oryza sativa Japonica Group] 1.0e-28
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent rna helicase a-like protein 1.35295e-40
Putative N-terminus
sp_v2.0_unigene25139 SustainPine v2.0 2083
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-tubulin 2 0.0
Complete
sp_v2.0_unigene25172 SustainPine v2.0 1321
AutoFact: Dof domain zinc finger DNA-binding protein n=1 Tax=Picea abies RepID=Q14DX9_PICAB 5.0e-31
FL-Next: sp=Dof zinc finger protein DOF2.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box family protein 6.92407e-34
Complete
sp_v2.0_unigene25176 SustainPine v2.0 1183
AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-3C/D chain-like n=1 Tax=Pongo abelii RepID=UPI0001D601A7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha tubulin 0.0
N-terminus
sp_v2.0_unigene25350 SustainPine v2.0 1963
AutoFact: Tubulin alpha-2/alpha-4 chain n=384 Tax=Eukaryota RepID=TBA2_ARATH 0.0
FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
Blast2go: alpha tubulin 1 0.0
Complete
sp_v2.0_unigene25435 SustainPine v2.0 1484
AutoFact: DOF domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZIX8_MALDO 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 0.0
Complete
sp_v2.0_unigene25690 SustainPine v2.0 462
AutoFact: Dof zinc finger protein 12 n=1 Tax=Hordeum vulgare subsp. vulgare RepID=A5HWG1_HORVD 4.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dof zinc finger protein 2.41959e-40
N-terminus
sp_v2.0_unigene25855 SustainPine v2.0 601
AutoFact: Tubulin beta chain, putative n=2 Tax=Eukaryota RepID=B9S382_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-tubulin 0.0
Internal
sp_v2.0_unigene26062 SustainPine v2.0 1035
AutoFact: Os01g0844800 protein n=3 Tax=Oryza sativa RepID=Q0JHT2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pumilio homolog 1-like 0.0
Complete
sp_v2.0_unigene26186 SustainPine v2.0 1697
AutoFact: protein N-terminal asparagine amidohydrolase family protein [Arabidopsis thaliana] gb|AAC16088.2| expressed protein [Arabidopsis thaliana] dbj|BAC42174.1| unknown protein [Arabidopsis thaliana] gb|AAO50636.1| unknown protein [Arabidopsis thaliana] gb|AEC1 0.0
FL-Next: tr=N-terminal asparagine amidohydrolase family protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: protein n-terminal asparagine amidohydrolase 0.0
Complete
sp_v2.0_unigene26305 SustainPine v2.0 952
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SWQ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine protein 0.0
Internal
sp_v2.0_unigene27052 SustainPine v2.0 1745
AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 0.0
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein hdg2-like 0.0
C-terminus
sp_v2.0_unigene27120 SustainPine v2.0 433
AutoFact: Unassigned protein
unknown
sp_v2.0_unigene27305 SustainPine v2.0 869
AutoFact: major facilitator protein [Arabidopsis thaliana] gb|AAL31925.1|AF419593_1 At2g39210/T16B24.15 [Arabidopsis thaliana] gb|AAC28987.1| nodulin-like protein [Arabidopsis thaliana] gb|AEC09646.1| major facilitator protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nodulin family protein 0.0
Putative C-terminus
sp_v2.0_unigene27507 SustainPine v2.0 545
AutoFact: DOF domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZIX8_MALDO 2.0e-39
FL-Next: tr=Dof transcription factor; Pinus pinaster (Maritime pine). 0.0
Blast2go: dof zinc finger 0.0
N-terminus
sp_v2.0_unigene28082 SustainPine v2.0 1889
AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 0.0
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein hdg2-like 0.0
C-terminus
sp_v2.0_unigene28185 SustainPine v2.0 2785
AutoFact: Nucleic acid binding NABP [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pumilio homolog 2-like 0.0
Complete
sp_v2.0_unigene28566 SustainPine v2.0 1754
AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 0.0
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein hdg2-like 0.0
C-terminus
sp_v2.0_unigene28598 SustainPine v2.0 3104
AutoFact: Os01g0844800 protein n=3 Tax=Oryza sativa RepID=Q0JHT2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pumilio homolog 2-like 0.0
Complete
sp_v2.0_unigene28674 SustainPine v2.0 615
AutoFact: SBP-domain protein3 [Zea mays] emb|CAB56629.1| SBP-domain protein 3 [Zea mays] 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.23681e-33
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain