Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: SWIRM domain

Term: IPR007526  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene249 SustainPine v2.0 1185
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9T0T3_RICCO 2.0e-32
FL-Next: sp=Dof zinc finger protein DOF2.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dof zinc finger protein 8.13057e-36
Complete
sp_v2.0_unigene587 SustainPine v2.0 2111
AutoFact: Transcriptional adapter ADA2 n=9 Tax=Poaceae RepID=TADA2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcriptional adapter ada2-like 0.0
N-terminus
sp_v2.0_unigene1959 SustainPine v2.0 2148
AutoFact: SWI/SNF complex subunit SWI3B [Arabidopsis thaliana] sp|Q84JG2.1|SWI3B_ARATH RecName: Full=SWI/SNF complex subunit SWI3B; Short=AtSWI3B; AltName: Full=Transcription regulatory protein SWI3B gb|AAO42112.1| putative SWI/SNF complex subunit SW13 [Arabidopsis 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swi snf complex subunit swi3b 0.0
C-terminus
sp_v2.0_unigene3091 SustainPine v2.0 994
AutoFact: Lysine-specific histone demethylase 1 homolog 3 n=3 Tax=Oryza sativa RepID=LDL3_ORYSJ 3.0e-37
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: flowering locus d 0.0
C-terminus
sp_v2.0_unigene6843 SustainPine v2.0 1390
AutoFact: Surfeit locus protein 2 (SURF2) [Arabidopsis thaliana] emb|CAB87783.1| putative protein [Arabidopsis thaliana] dbj|BAF01166.1| hypothetical protein [Arabidopsis thaliana] gb|AED92035.1| Surfeit locus protein 2 (SURF2) [Arabidopsis thaliana] 6.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: surfeit locus protein 2 0.0
Complete
sp_v2.0_unigene8815 SustainPine v2.0 1623
AutoFact: SWI/SNF complex subunit SWI3C [Arabidopsis thaliana] sp|Q9XI07.1|SWI3C_ARATH RecName: Full=SWI/SNF complex subunit SWI3C; Short=AtSWI3C; AltName: Full=Transcription regulatory protein SWI3C gb|AAD41423.1|AC007727_12 Contains similarity to gb|AF033823 moir 0.0
FL-Next: sp=SWI/SNF complex subunit SWI3C; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swi snf complex subunit swi3c-like 0.0
Putative C-terminus
sp_v2.0_unigene8962 SustainPine v2.0 661
AutoFact: Unassigned protein
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: lysine-specific histone demethylase 1 homolog 3-like 3.85211e-09
C-terminus
sp_v2.0_unigene10240 SustainPine v2.0 1896
AutoFact: Lysine-specific histone demethylase, putative n=1 Tax=Ricinus communis RepID=B9R844_RICCO 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lysine-specific histone demethylase-like protein 0.0
C-terminus
sp_v2.0_unigene10759 SustainPine v2.0 1938
AutoFact: Dof transcription factor n=1 Tax=Pinus pinaster RepID=B0BCH1_PINPS 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 0.0
Complete
sp_v2.0_unigene11122 SustainPine v2.0 2506
AutoFact: SWI/SNF complex subunit SWI3A [Arabidopsis thaliana] sp|Q8W475.1|SWI3A_ARATH RecName: Full=SWI/SNF complex subunit SWI3A; Short=AtSWI3A; AltName: Full=Transcription regulatory protein SWI3A gb|AAL32872.1| putative SWI/SNF family transcription activator [A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swi snf complex subunit swi3a 0.0
Complete
sp_v2.0_unigene11427 SustainPine v2.0 711
AutoFact: pfam02701, zf-Dof, Dof domain, zinc finger 2.0e-38
FL-Next: tr=Dof domain zinc finger DNA-binding protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: dof zinc finger 0.0
Internal
sp_v2.0_unigene12281 SustainPine v2.0 467
AutoFact: Lysine-specific histone demethylase, putative n=1 Tax=Ricinus communis RepID=B9R844_RICCO 3.0e-35
FL-Next: tr=Lysine-specific histone demethylase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: lysine-specific histone demethylase-like protein 5.99432e-35
Internal
sp_v2.0_unigene14552 SustainPine v2.0 851
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 2.0721e-41
Putative C-terminus
sp_v2.0_unigene21732 SustainPine v2.0 1649
AutoFact: Lysine-specific histone demethylase, putative n=1 Tax=Ricinus communis RepID=B9R844_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lysine-specific histone demethylase-like protein 0.0
N-terminus
sp_v2.0_unigene25172 SustainPine v2.0 1321
AutoFact: Dof domain zinc finger DNA-binding protein n=1 Tax=Picea abies RepID=Q14DX9_PICAB 5.0e-31
FL-Next: sp=Dof zinc finger protein DOF2.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box family protein 6.92407e-34
Complete
sp_v2.0_unigene29042 SustainPine v2.0 450
AutoFact: Chromatin remodeling factor subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SU94_PHYPA 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
N-terminus
sp_v2.0_unigene29918 SustainPine v2.0 1690
AutoFact: Dof transcription factor n=1 Tax=Pinus pinaster RepID=B0BCH1_PINPS 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 0.0
Complete
sp_v2.0_unigene33475 SustainPine v2.0 799
AutoFact: SWI/SNF complex subunit SWI3C [Arabidopsis thaliana] sp|Q9XI07.1|SWI3C_ARATH RecName: Full=SWI/SNF complex subunit SWI3C; Short=AtSWI3C; AltName: Full=Transcription regulatory protein SWI3C gb|AAD41423.1|AC007727_12 Contains similarity to gb|AF033823 moir 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swi snf complex subunit swi3c-like 0.0
Putative N-terminus
sp_v2.0_unigene39059 SustainPine v2.0 502
AutoFact: Lysine-specific histone demethylase 1 homolog 3 n=3 Tax=Oryza sativa RepID=LDL3_ORYSJ 0.0
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: flowering locus d 0.0
Internal
sp_v2.0_unigene39122 SustainPine v2.0 712
AutoFact: flowering locus D [Arabidopsis thaliana] 3.0e-26
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swirm domain protein 5.55405e-34
Putative N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain