Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: SWIRM domain

Term: IPR007526  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene48487 SustainPine v2.0 455
• AutoFact: Lysine-specific histone demethylase 1 homolog 3 n=3 Tax=Oryza sativa RepID=LDL3_ORYSJ 3.0e-10
• FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: flowering locus d 1.01732e-12
C-terminus
sp_v2.0_unigene48852 SustainPine v2.0 458
• AutoFact: Lysine-specific histone demethylase, putative n=1 Tax=Ricinus communis RepID=B9R844_RICCO 5.00264e-43
• FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: lysine-specific histone demethylase-like protein 0.0
Internal
sp_v2.0_unigene49170 SustainPine v2.0 171
• AutoFact: pfam01593, Amino_oxidase, Flavin containing amine oxidoreductase 3.0e-11
• FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: flowering locus d 3.98885e-26
Internal
sp_v2.0_unigene52635 SustainPine v2.0 210
• AutoFact: Lysine-specific histone demethylase 1 homolog 3 n=3 Tax=Arabidopsis RepID=LDL3_ARATH 4.0e-10
• FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: lysine-specific histone demethylase 1 homolog 3-like 2.28939e-12
Internal
sp_v2.0_unigene59025 SustainPine v2.0 207
• AutoFact: pfam01593, Amino_oxidase, Flavin containing amine oxidoreductase 9.0e-15
• FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: flowering locus d 1.46128e-30
Internal
sp_v2.0_unigene70120 SustainPine v2.0 310
• AutoFact: Dof zinc finger protein DOF5.2 [Arabidopsis thaliana] ref|NP_851106.1| Dof zinc finger protein DOF5.2 [Arabidopsis thaliana] sp|Q93ZL5.2|DOF52_ARATH RecName: Full=Dof zinc finger protein DOF5.2; Short=AtDOF5.2 gb|AAU90081.1| At5g39660 [Arabidopsis thalian 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dof zinc finger protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain