Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Spen paralogue and orthologue SPOC, C-terminal

Term: IPR012921  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene333 SustainPine v2.0 2790
AutoFact: SPOC multi-domain protein 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: spoc domain transcription elongation factor s-ii protein 0.0
C-terminus
sp_v2.0_unigene1633 SustainPine v2.0 2015
AutoFact: RNA recognition motif-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SU08_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flowering time control protein fpa 0.0
N-terminus
sp_v2.0_unigene2690 SustainPine v2.0 789
AutoFact: nucleic acid binding protein [Arabidopsis thaliana] gb|AAM13844.1| unknown protein [Arabidopsis thaliana] gb|AEE30872.1| nucleic acid binding protein [Arabidopsis thaliana] 1.0e-16
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: nucleic acid binding protein 5.54161e-25
Internal
sp_v2.0_unigene3773 SustainPine v2.0 1860
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SEZ1_RICCO 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flowering time control protein fpa 0.0
C-terminus
sp_v2.0_unigene6660 SustainPine v2.0 1417
AutoFact: RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gb|AEE83159.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene12014 SustainPine v2.0 613
AutoFact: Ubiquitin system component Cue protein [Arabidopsis thaliana] gb|AEE30873.1| Ubiquitin system component Cue protein [Arabidopsis thaliana] 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Trifolium repens (Creeping white clover). 0.0
Blast2go: ubiquitin system component cue protein 6.34634e-37
Internal
sp_v2.0_unigene13059 SustainPine v2.0 659
AutoFact: Ubiquitin system component Cue protein n=1 Tax=Arabidopsis thaliana RepID=B3H6L4_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: ubiquitin system component cue protein 0.0
Internal
sp_v2.0_unigene15232 SustainPine v2.0 806
AutoFact: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 [Arabidopsis thaliana] sp|Q67ZE1.2|HSDD2_ARATH RecName: Full=3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2; Short=At3BETAHSD/D2; AltName: Full=4alpha-carboxysterol-C3-dehydrogenase/C4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3beta-hydroxysteroid-dehydrogenase decarboxylase isoform 2 0.0
Internal
sp_v2.0_unigene17967 SustainPine v2.0 1961
AutoFact: FPA (Fragment) n=1 Tax=Pisum sativum RepID=Q52ZH7_PEA 6.00036e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flowering time control protein fpa 7.00649e-45
C-terminus
sp_v2.0_unigene25736 SustainPine v2.0 428
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
Internal
sp_v2.0_unigene31897 SustainPine v2.0 143
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v2.0_unigene36368 SustainPine v2.0 828
AutoFact: RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gb|AEE83159.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene38484 SustainPine v2.0 358
AutoFact: Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating n=1 Tax=Zea mays RepID=B6TKP9_MAIZE 5.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3beta-hydroxysteroid-dehydrogenase decarboxylase isoform 1 8.77759e-41
Putative N-terminus
sp_v2.0_unigene48860 SustainPine v2.0 431
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_1.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CP33_VITVI 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nucleic acid binding protein 5.09372e-42
Internal
sp_v2.0_unigene55754 SustainPine v2.0 321
AutoFact: nucleic acid binding protein [Arabidopsis thaliana] gb|AAM13844.1| unknown protein [Arabidopsis thaliana] gb|AEE30872.1| nucleic acid binding protein [Arabidopsis thaliana] 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nucleic acid binding protein 2.04661e-27
Internal
sp_v2.0_unigene65006 SustainPine v2.0 342
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 5.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flowering time control protein fpa 8.03753e-21
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain