Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Reticulon

Term: IPR003388  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1279 SustainPine v2.0 1540
AutoFact: Reticulon domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene2008 SustainPine v2.0 1015
AutoFact: reticulon-like protein B5 [Arabidopsis thaliana] sp|O82352.1|RTNLE_ARATH RecName: Full=Reticulon-like protein B5; Short=AtRTNLB5 gb|AAC62889.1| expressed protein [Arabidopsis thaliana] gb|AAK96651.1| At2g46170/T3F17.18 [Arabidopsis thaliana] gb|AAL69534.1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reticulon-like protein b2-like isoform 1 0.0
Complete
sp_v2.0_unigene2659 SustainPine v2.0 1025
AutoFact: reticulon-like protein B21 [Arabidopsis thaliana] sp|Q56X72.2|RTNLS_ARATH RecName: Full=Reticulon-like protein B21; Short=AtRTNLB21 gb|AED96983.1| reticulon-like protein B21 [Arabidopsis thaliana] 3.0e-35
FL-Next: sp=Reticulon-like protein B21; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 1.3497e-40
Putative C-terminus
sp_v2.0_unigene2763 SustainPine v2.0 1511
AutoFact: Hydroxyacylglutathione hydrolase 2 [Arabidopsis thaliana] gb|AEC08531.1| Hydroxyacylglutathione hydrolase 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glyoxalase ii 0.0
Putative Complete
sp_v2.0_unigene3878 SustainPine v2.0 1093
AutoFact: Nucleotid_trans domain containing protein 1.0e-05
FL-Next: tr=Putative uncharacterized protein Sb01g015590; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: xyloglucanase 113 0.0
C-terminus
sp_v2.0_unigene4244 SustainPine v2.0 1146
AutoFact: reticulon-like protein B16 [Arabidopsis thaliana] sp|Q8GYH6.1|RTNLP_ARATH RecName: Full=Reticulon-like protein B16; Short=AtRTNLB16 dbj|BAC42275.1| unknown protein [Arabidopsis thaliana] gb|AAO50641.1| unknown protein [Arabidopsis thaliana] gb|AEE74972.1| 5.0e-32
FL-Next: sp=Reticulon-like protein B16; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene4358 SustainPine v2.0 1248
AutoFact: reticulon-like protein B22 [Arabidopsis thaliana] sp|Q8GWH5.1|RTNLT_ARATH RecName: Full=Reticulon-like protein B22; Short=AtRTNLB22 dbj|BAC43428.1| unknown protein [Arabidopsis thaliana] gb|AAO63877.1| unknown protein [Arabidopsis thaliana] gb|AEE36170.1| 7.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reticulon-like protein b22 0.0
Complete
sp_v2.0_unigene4724 SustainPine v2.0 702
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: udp-galactose:fucoside alpha-3-galactosyltransferase 1.17247e-40
C-terminus
sp_v2.0_unigene6425 SustainPine v2.0 2584
AutoFact: reticulon-like protein B21 [Arabidopsis thaliana] sp|Q56X72.2|RTNLS_ARATH RecName: Full=Reticulon-like protein B21; Short=AtRTNLB21 gb|AED96983.1| reticulon-like protein B21 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene8497 SustainPine v2.0 1035
AutoFact: Reticulon-like protein B23 n=1 Tax=Arabidopsis thaliana RepID=RTNLU_ARATH 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reticulon-like protein b22 8.47156e-34
Complete
sp_v2.0_unigene8919 SustainPine v2.0 1475
AutoFact: reticulon-like protein B16 [Arabidopsis thaliana] sp|Q8GYH6.1|RTNLP_ARATH RecName: Full=Reticulon-like protein B16; Short=AtRTNLB16 dbj|BAC42275.1| unknown protein [Arabidopsis thaliana] gb|AAO50641.1| unknown protein [Arabidopsis thaliana] gb|AEE74972.1| 1.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reticulon-like protein b12 0.0
Complete
sp_v2.0_unigene9091 SustainPine v2.0 1787
AutoFact: reticulon-like protein B8 [Arabidopsis thaliana] ref|NP_850551.1| reticulon-like protein B8 [Arabidopsis thaliana] sp|Q9SS37.1|RTNLH_ARATH RecName: Full=Reticulon-like protein B8; Short=AtRTNLB8 gb|AAF02816.1|AC009400_12 unknown protein [Arabidopsis thali 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reticulon-like protein b8 0.0
Complete
sp_v2.0_unigene9185 SustainPine v2.0 665
AutoFact: Nucleotide-diphospho-sugar transferase family protein [Arabidopsis thaliana] gb|AEE35092.1| Nucleotide-diphospho-sugar transferase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycosyltransferase-like protein 0.0
Internal
sp_v2.0_unigene13848 SustainPine v2.0 1004
AutoFact: reticulon-like protein B5 [Arabidopsis thaliana] sp|O82352.1|RTNLE_ARATH RecName: Full=Reticulon-like protein B5; Short=AtRTNLB5 gb|AAC62889.1| expressed protein [Arabidopsis thaliana] gb|AAK96651.1| At2g46170/T3F17.18 [Arabidopsis thaliana] gb|AAL69534.1 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene15232 SustainPine v2.0 806
AutoFact: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 [Arabidopsis thaliana] sp|Q67ZE1.2|HSDD2_ARATH RecName: Full=3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2; Short=At3BETAHSD/D2; AltName: Full=4alpha-carboxysterol-C3-dehydrogenase/C4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3beta-hydroxysteroid-dehydrogenase decarboxylase isoform 2 0.0
Internal
sp_v2.0_unigene15405 SustainPine v2.0 1712
AutoFact: Reticulon domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 24 kda seed maturation protein 0.0
Complete
sp_v2.0_unigene16884 SustainPine v2.0 1474
AutoFact: 24 kDa seed maturation protein n=1 Tax=Elaeis guineensis RepID=B3TLN1_ELAGV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 24 kda seed maturation protein 0.0
Complete
sp_v2.0_unigene19479 SustainPine v2.0 985
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: glycosyltransferase-like protein 0.0
Putative N-terminus
sp_v2.0_unigene21742 SustainPine v2.0 2546
AutoFact: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 [Arabidopsis thaliana] sp|Q67ZE1.2|HSDD2_ARATH RecName: Full=3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2; Short=At3BETAHSD/D2; AltName: Full=4alpha-carboxysterol-C3-dehydrogenase/C4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3beta-hydroxysteroid-dehydrogenase decarboxylase isoform 2 0.0
Complete
sp_v2.0_unigene27050 SustainPine v2.0 2020
AutoFact: Nucleotide-diphospho-sugar transferase family protein [Arabidopsis thaliana] gb|AAF79453.1|AC025808_35 F18O14.8 [Arabidopsis thaliana] gb|AAM65662.1| unknown [Arabidopsis thaliana] gb|ABG25079.1| At1g19360 [Arabidopsis thaliana] dbj|BAF00917.1| hypothetic 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleotide-diphospho-sugar transferase family protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain