Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Endonuclease III, iron-sulphur binding site

Term: IPR004035  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1245 SustainPine v2.0 2088
AutoFact: A/G-specific adenine glycosylase [Arabidopsis thaliana] gb|AEE83174.1| A/G-specific adenine glycosylase [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: a g-specific adenine dna glycosylase 0.0
Putative Complete
sp_v2.0_unigene4400 SustainPine v2.0 376
AutoFact: Unassigned protein
FL-Next: sp=Protein ROS1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcriptional activator demeter-like 0.0
Internal
sp_v2.0_unigene10517 SustainPine v2.0 606
AutoFact: Endonuclease III, putative n=1 Tax=Ricinus communis RepID=B9T798_RICCO 1.4013e-45
FL-Next: tr=Endonuclease III, putative; Ricinus communis (Castor bean). 0.0
Blast2go: endonuclease iii 0.0
Internal
sp_v2.0_unigene13208 SustainPine v2.0 569
AutoFact: transcriptional activator DEMETER [Arabidopsis thaliana] sp|Q8LK56.2|DME_ARATH RecName: Full=Transcriptional activator DEMETER; AltName: Full=DNA glycosylase-related protein DME gb|ABC61677.1| DNA glycosylase DEMETER [Arabidopsis thaliana] gb|AED90761.1| 2.0e-34
FL-Next: Isoform 1 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Blast2go: transcriptional activator demeter-like 4.09832e-39
Internal
sp_v2.0_unigene14699 SustainPine v2.0 1189
AutoFact: Ubiquitin carrier protein (Fragment) n=2 Tax=Magnoliophyta RepID=Q677E9_HYAOR 5.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin carrier protein 1.51761e-41
Putative Complete
sp_v2.0_unigene16302 SustainPine v2.0 1590
AutoFact: ubiquitin conjugating enzyme-like [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubc37 like protein 0.0
Complete
sp_v2.0_unigene17858 SustainPine v2.0 736
AutoFact: endonuclease III [Arabidopsis thaliana] gb|AAD26474.2| putative endonuclease [Arabidopsis thaliana] gb|AEC08549.1| endonuclease III [Arabidopsis thaliana] 3.0e-34
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: endonuclease iii 1.4013e-44
C-terminus
sp_v2.0_unigene24870 SustainPine v2.0 822
AutoFact: transcriptional activator DEMETER [Arabidopsis thaliana] sp|Q8LK56.2|DME_ARATH RecName: Full=Transcriptional activator DEMETER; AltName: Full=DNA glycosylase-related protein DME gb|ABC61677.1| DNA glycosylase DEMETER [Arabidopsis thaliana] gb|AED90761.1| 2.0e-11
FL-Next: Isoform 1 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Blast2go: transcriptional activator demeter-like 1.15444e-12
Internal
sp_v2.0_unigene25094 SustainPine v2.0 739
AutoFact: DME; DME (DEMETER); DNA N-glycosylase/ DNA-(apurinic or apyrimidinic site) lyase 8.00141e-43
FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Blast2go: transcriptional activator demeter-like 0.0
Internal
sp_v2.0_unigene25315 SustainPine v2.0 636
AutoFact: DNA glycosylase (Fragment) n=1 Tax=Populus trichocarpa RepID=B9MTP0_POPTR 0.0
FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Blast2go: dna glycosylase 0.0
C-terminus
sp_v2.0_unigene33242 SustainPine v2.0 698
AutoFact: endonuclease III [Arabidopsis thaliana] gb|AAD26474.2| putative endonuclease [Arabidopsis thaliana] gb|AEC08549.1| endonuclease III [Arabidopsis thaliana] 1.0e-36
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: endonuclease iii 0.0
C-terminus
sp_v2.0_unigene37337 SustainPine v2.0 590
AutoFact: Transcriptional activator DEMETER n=2 Tax=Arabidopsis thaliana RepID=DME_ARATH 5.0e-27
FL-Next: Isoform 1 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Blast2go: transcriptional activator demeter 2.87142e-30
Internal
sp_v2.0_unigene38987 SustainPine v2.0 749
AutoFact: HhH-GPD domain containing protein 6.0e-16
FL-Next: sp=Protein ROS1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna glycosylase 0.0
Internal
sp_v2.0_unigene44621 SustainPine v2.0 221
AutoFact: Repressor of silencing 1 n=1 Tax=Nicotiana tabacum RepID=A4PF88_TOBAC 3.0e-28
FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Blast2go: 5-methylcytosine dna glycosylase 8.30369e-35
Internal
sp_v2.0_unigene91805 SustainPine v2.0 161
AutoFact: Unassigned protein
FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Blast2go: transcriptional activator demeter-like 1.26798e-13
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain