Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: HhH-GPD domain

Term: IPR003265  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene21359 SustainPine v2.0 1888
AutoFact: putative GTP-binding protein [Arabidopsis thaliana] emb|CAB87708.1| putative GTP-binding protein [Arabidopsis thaliana] gb|AAL25554.1| AT5g11480/F15N18_70 [Arabidopsis thaliana] gb|AAN28859.1| At5g11480/F15N18_70 [Arabidopsis thaliana] gb|AED91684.1| puta 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtp-binding protein 0.0
Complete
sp_v2.0_unigene24701 SustainPine v2.0 597
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 9.94922e-44
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
C-terminus
sp_v2.0_unigene24870 SustainPine v2.0 822
AutoFact: transcriptional activator DEMETER [Arabidopsis thaliana] sp|Q8LK56.2|DME_ARATH RecName: Full=Transcriptional activator DEMETER; AltName: Full=DNA glycosylase-related protein DME gb|ABC61677.1| DNA glycosylase DEMETER [Arabidopsis thaliana] gb|AED90761.1| 2.0e-11
FL-Next: Isoform 1 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Blast2go: transcriptional activator demeter-like 1.15444e-12
Internal
sp_v2.0_unigene25094 SustainPine v2.0 739
AutoFact: DME; DME (DEMETER); DNA N-glycosylase/ DNA-(apurinic or apyrimidinic site) lyase 8.00141e-43
FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Blast2go: transcriptional activator demeter-like 0.0
Internal
sp_v2.0_unigene25315 SustainPine v2.0 636
AutoFact: DNA glycosylase (Fragment) n=1 Tax=Populus trichocarpa RepID=B9MTP0_POPTR 0.0
FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Blast2go: dna glycosylase 0.0
C-terminus
sp_v2.0_unigene25935 SustainPine v2.0 497
AutoFact: 8-oxoguanine DNA glycosylase [Populus nigra] 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: n-glycosylase dna lyase 1.84048e-38
C-terminus
sp_v2.0_unigene28330 SustainPine v2.0 1114
AutoFact: RVT_2 domain containing protein 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 0.0
C-terminus
sp_v2.0_unigene30870 SustainPine v2.0 522
AutoFact: HhH-GPD domain containing protein 5.0e-11
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene32679 SustainPine v2.0 684
AutoFact: Os07g0434200 protein (Fragment) n=2 Tax=Oryza sativa RepID=Q0D6W3_ORYSJ 2.0e-29
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: retrotransposon unclassified 2.27842e-36
C-terminus
sp_v2.0_unigene32883 SustainPine v2.0 561
AutoFact: DNA-3-methyladenine glycosylase, putative n=1 Tax=Ricinus communis RepID=B9S6F5_RICCO 1.0e-26
FL-Next: tr=DNA-3-methyladenine glycosylase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: dna-3-methyladenine glycosylase 1 8.02557e-32
C-terminus
sp_v2.0_unigene32949 SustainPine v2.0 438
AutoFact: RVT_2 domain containing protein 3.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hypothetical protein VITISV_027864 [Vitis vinifera] 1.65073e-42
Putative C-terminus
sp_v2.0_unigene32963 SustainPine v2.0 524
AutoFact: T26F17.17 n=1 Tax=Arabidopsis thaliana RepID=Q9SFE1_ARATH 7.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 1.56664e-37
Putative C-terminus
sp_v2.0_unigene32982 SustainPine v2.0 811
AutoFact: Gag and Pol n=1 Tax=Zea mays RepID=Q8LSK0_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
N-terminus
sp_v2.0_unigene33242 SustainPine v2.0 698
AutoFact: endonuclease III [Arabidopsis thaliana] gb|AAD26474.2| putative endonuclease [Arabidopsis thaliana] gb|AEC08549.1| endonuclease III [Arabidopsis thaliana] 1.0e-36
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: endonuclease iii 0.0
C-terminus
sp_v2.0_unigene33857 SustainPine v2.0 976
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y141_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
N-terminus
sp_v2.0_unigene34842 SustainPine v2.0 1004
AutoFact: WS0336.C21_F15 WS-SE-N-A-18 Picea glauca cDNA clone WS0336_F15 3, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Putative C-terminus
sp_v2.0_unigene37073 SustainPine v2.0 671
AutoFact: Integrase n=1 Tax=Cucumis melo subsp. melo RepID=A6YTD9_CUCME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 0.0
C-terminus
sp_v2.0_unigene37337 SustainPine v2.0 590
AutoFact: Transcriptional activator DEMETER n=2 Tax=Arabidopsis thaliana RepID=DME_ARATH 5.0e-27
FL-Next: Isoform 1 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Blast2go: transcriptional activator demeter 2.87142e-30
Internal
sp_v2.0_unigene37368 SustainPine v2.0 458
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 2.0e-40
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retrotransposon unclassified 1.09305e-40
Internal
sp_v2.0_unigene38294 SustainPine v2.0 597
AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 8.00001e-41
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: copia-type polyprotein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain