Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: AT hook, DNA-binding motif

Term: IPR017956  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene21324 SustainPine v2.0 701
AutoFact: DUF248 domain containing protein 3.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene22055 SustainPine v2.0 411
AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 2.0e-21
FL-Next: sp=Protease Do-like 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: serine endopeptidase 5.249e-28
Internal
sp_v2.0_unigene22272 SustainPine v2.0 1078
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h1-like protein 0.0
Complete
sp_v2.0_unigene22345 SustainPine v2.0 2129
AutoFact: AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_850215.1| AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_973590.1| AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_001118437.1| AT hook m 8.40779e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at hook motif dna-binding family protein 0.0
Complete
sp_v2.0_unigene22669 SustainPine v2.0 799
AutoFact: HC2 multi-domain protein 9.0e-16
Coding
sp_v2.0_unigene22875 SustainPine v2.0 577
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-like protein 0.0
N-terminus
sp_v2.0_unigene23108 SustainPine v2.0 882
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h1-like protein 0.0
Complete
sp_v2.0_unigene23517 SustainPine v2.0 944
AutoFact: Putative histone H1 n=1 Tax=Cryptomeria japonica RepID=Q1XG59_CRYJA 3.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-like protein 0.0
Complete
sp_v2.0_unigene23546 SustainPine v2.0 977
AutoFact: Histone H1 linker n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RTA3_PHYPA 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h1-like protein 1.629e-26
Putative Complete
sp_v2.0_unigene23760 SustainPine v2.0 1230
AutoFact: Putative histone H1 n=1 Tax=Cryptomeria japonica RepID=Q1XG59_CRYJA 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-like protein 6.59534e-40
Complete
sp_v2.0_unigene23808 SustainPine v2.0 606
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at hook motif-containing protein 0.0
N-terminus
sp_v2.0_unigene23853 SustainPine v2.0 807
AutoFact: Histone H1-II n=2 Tax=Volvox carteri RepID=H12_VOLCA 2.0e-05
FL-Next: sp=Histone H1-II; Volvox carteri (Green alga). 0.0
Blast2go: unknown [Picea sitchensis] 3.1788e-10
Complete
sp_v2.0_unigene23914 SustainPine v2.0 703
AutoFact: Histone H1-like protein (Fragment) n=15 Tax=Picea sitchensis RepID=E0ZG68_PICSI 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h1-like protein 1.84603e-16
N-terminus
sp_v2.0_unigene24870 SustainPine v2.0 822
AutoFact: transcriptional activator DEMETER [Arabidopsis thaliana] sp|Q8LK56.2|DME_ARATH RecName: Full=Transcriptional activator DEMETER; AltName: Full=DNA glycosylase-related protein DME gb|ABC61677.1| DNA glycosylase DEMETER [Arabidopsis thaliana] gb|AED90761.1| 2.0e-11
FL-Next: Isoform 1 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Blast2go: transcriptional activator demeter-like 1.15444e-12
Internal
sp_v2.0_unigene24948 SustainPine v2.0 910
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 5.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-like protein 0.0
Complete
sp_v2.0_unigene25094 SustainPine v2.0 739
AutoFact: DME; DME (DEMETER); DNA N-glycosylase/ DNA-(apurinic or apyrimidinic site) lyase 8.00141e-43
FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Blast2go: transcriptional activator demeter-like 0.0
Internal
sp_v2.0_unigene25096 SustainPine v2.0 709
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 4.90509e-23
N-terminus
sp_v2.0_unigene25293 SustainPine v2.0 653
AutoFact: ATPase splayed [Arabidopsis thaliana] gb|AEC08101.1| ATPase splayed [Arabidopsis thaliana] 0.0
FL-Next: sp=ATP-dependent helicase BRM; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atpase splayed 0.0
Internal
sp_v2.0_unigene25315 SustainPine v2.0 636
AutoFact: DNA glycosylase (Fragment) n=1 Tax=Populus trichocarpa RepID=B9MTP0_POPTR 0.0
FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Blast2go: dna glycosylase 0.0
C-terminus
sp_v2.0_unigene25317 SustainPine v2.0 1234
AutoFact: AT hook motif-containing protein [Arabidopsis thaliana] dbj|BAH20420.1| AT5G54930 [Arabidopsis thaliana] gb|AED96559.1| AT hook motif-containing protein [Arabidopsis thaliana] 7.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at hook motif-containing protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain