Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: AT hook, DNA-binding motif

Term: IPR017956  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene81535 SustainPine v2.0 726
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 5.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h1-like protein 0.0
N-terminus
sp_v2.0_unigene81736 SustainPine v2.0 524
AutoFact: Histone H1 linker n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RX26_PHYPA 5.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h1-like protein 1.50481e-14
Complete
sp_v2.0_unigene81809 SustainPine v2.0 450
AutoFact: Histone H1-like protein (Fragment) n=15 Tax=Picea sitchensis RepID=E0ZG68_PICSI 4.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h1-like protein 1.93576e-29
Putative N-terminus
sp_v2.0_unigene84410 SustainPine v2.0 874
AutoFact: Histone H1-like protein (Fragment) n=15 Tax=Picea sitchensis RepID=E0ZG68_PICSI 5.0e-29
FL-Next: sp=Histone H1; Solanum pennellii (Tomato) (Lycopersicon pennellii). 0.0
Blast2go: histone h1-like protein 1.50929e-34
Complete
sp_v2.0_unigene84875 SustainPine v2.0 1345
AutoFact: Alba multi-domain protein 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alba-like protein c9orf23 homolog 0.0
Complete
sp_v2.0_unigene85356 SustainPine v2.0 1088
AutoFact: AT-hook DNA-binding protein [Gossypium hirsutum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene85785 SustainPine v2.0 955
AutoFact: protein TRANSPARENT TESTA 12 [Arabidopsis thaliana] sp|Q9LYT3.1|TT12_ARATH RecName: Full=Protein TRANSPARENT TESTA 12; AltName: Full=MATE efflux family protein TT12; AltName: Full=Protein DTX41 emb|CAB86931.1| putative protein [Arabidopsis thaliana] emb|C 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transparent testa 12 0.0
C-terminus
sp_v2.0_unigene85852 SustainPine v2.0 353
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.86988e-31
Internal
sp_v2.0_unigene86186 SustainPine v2.0 347
AutoFact: Microtubule-associated protein MAP65-1b n=2 Tax=Nicotiana tabacum RepID=Q9FEV8_TOBAC 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: microtubule-associated protein map65-1a 1.45481e-25
N-terminus
sp_v2.0_unigene91805 SustainPine v2.0 161
AutoFact: Unassigned protein
FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Blast2go: transcriptional activator demeter-like 1.26798e-13
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain