Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: AT hook, DNA-binding motif

Term: IPR017956  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene67626 SustainPine v2.0 609
AutoFact: Putative histone H1 n=1 Tax=Cryptomeria japonica RepID=Q1XG59_CRYJA 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-like protein 0.0
N-terminus
sp_v2.0_unigene67652 SustainPine v2.0 361
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RSE9_RICCO 4.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein chloroplast 8.89514e-39
Putative N-terminus
sp_v2.0_unigene68042 SustainPine v2.0 310
AutoFact: Chromatin remodeling complex subunit n=3 Tax=Populus trichocarpa RepID=B9HM77_POPTR 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: atpase splayed 4.18749e-16
Internal
sp_v2.0_unigene68840 SustainPine v2.0 357
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribonuclease p protein subunit p25 8.81894e-26
N-terminus
sp_v2.0_unigene69100 SustainPine v2.0 428
AutoFact: Protein regulator of cytokinesis, putative n=1 Tax=Ricinus communis RepID=B9RHR0_RICCO 4.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: microtubule-associated protein map65-1a 3.20381e-25
N-terminus
sp_v2.0_unigene72125 SustainPine v2.0 273
AutoFact: Histone H1 linker n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RTA3_PHYPA 6.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h1 linker 6.00766e-12
Internal
sp_v2.0_unigene72288 SustainPine v2.0 264
AutoFact: Pathogenesis-related homeodomain protein [Arabidopsis thaliana] sp|P48785.1|PRH_ARATH RecName: Full=Pathogenesis-related homeodomain protein; Short=PRHA gb|AAA32843.1| homeodomain protein [Arabidopsis thaliana] gb|AAC49836.1| PRHA [Arabidopsis thaliana] e 3.0e-30
FL-Next: sp=Pathogenesis-related homeodomain protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pathogenesis-related homeodomain protein 1.6812e-39
Internal
sp_v2.0_unigene73702 SustainPine v2.0 358
AutoFact: sister chromatid cohesion protein PDS5 [Arabidopsis thaliana] gb|AED95551.1| sister chromatid cohesion protein PDS5 [Arabidopsis thaliana] 5.0e-24
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: sister chromatid cohesion protein pds5 2.1172e-28
Internal
sp_v2.0_unigene77124 SustainPine v2.0 666
AutoFact: Putative histone H1 n=1 Tax=Cryptomeria japonica RepID=Q1XG59_CRYJA 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h1-like protein 7.78668e-25
N-terminus
sp_v2.0_unigene77885 SustainPine v2.0 774
AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Protease Do-like 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protease do-like 9-like 0.0
Internal
sp_v2.0_unigene78048 SustainPine v2.0 416
AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine endopeptidase 1.74108e-38
Putative C-terminus
sp_v2.0_unigene78076 SustainPine v2.0 314
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: microtubule-associated protein map65-1a 1.02631e-10
N-terminus
sp_v2.0_unigene79880 SustainPine v2.0 316
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 6.0e-33
FL-Next: tr=Putative histone H1; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h1-like protein 1.84341e-41
Internal
sp_v2.0_unigene80014 SustainPine v2.0 909
AutoFact: Histone H1 linker n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RX26_PHYPA 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-like protein 1.19741e-41
Complete
sp_v2.0_unigene80398 SustainPine v2.0 503
AutoFact: API5 multi-domain protein 3.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100265751 3.85812e-17
C-terminus
sp_v2.0_unigene80481 SustainPine v2.0 706
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 4.0e-22
FL-Next: tr=Putative histone H1; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone-like protein 7.76407e-33
N-terminus
sp_v2.0_unigene80591 SustainPine v2.0 472
AutoFact: Histone H1 linker n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RX26_PHYPA 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-like protein 0.0
N-terminus
sp_v2.0_unigene80822 SustainPine v2.0 1511
AutoFact: AT hook motif-containing protein [Arabidopsis thaliana] dbj|BAH20420.1| AT5G54930 [Arabidopsis thaliana] gb|AED96559.1| AT hook motif-containing protein [Arabidopsis thaliana] 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at hook motif-containing protein 0.0
Complete
sp_v2.0_unigene81113 SustainPine v2.0 636
AutoFact: Putative histone H1 n=1 Tax=Cryptomeria japonica RepID=Q1XG59_CRYJA 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-like protein 5.23859e-34
N-terminus
sp_v2.0_unigene81254 SustainPine v2.0 374
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.4013e-45
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain