Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Tetratricopeptide repeat

Term: IPR019734  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene34582 SustainPine v2.0 440
AutoFact: Tetratricopeptide repeat-containing protein n=4 Tax=Arabidopsis RepID=F4HS68_ARATH 8.0e-20
FL-Next: tr=Tetratricopeptide repeat-containing protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: tetratricopeptide repeat-containing protein 1.54574e-19
Internal
sp_v2.0_unigene34900 SustainPine v2.0 394
AutoFact: TPR repeat-containing protein [Synechococcus sp. JA-2-3B'a(2-13)] gb|ABD03807.1| tetratricopeptide repeat protein [Synechococcus sp. JA-2-3B'a(2-13)] 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tpr repeat 4.41923e-39
C-terminus
sp_v2.0_unigene34914 SustainPine v2.0 650
AutoFact: protein EXORDIUM like 2 [Arabidopsis thaliana] gb|AAG41473.1|AF326891_1 putative phi-1 protein [Arabidopsis thaliana] gb|AAK00390.1|AF339708_1 putative phi-1 protein [Arabidopsis thaliana] gb|AAK55719.1|AF380638_1 AT5g64260/MSJ1_10 [Arabidopsis thaliana] 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
C-terminus
sp_v2.0_unigene35158 SustainPine v2.0 598
AutoFact: Heat shock protein 70 (Fragment) n=1 Tax=Picea glauca RepID=Q40846_PICGL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock 0.0
Internal
sp_v2.0_unigene35203 SustainPine v2.0 1214
AutoFact: adenine nucleotide alpha hydrolase domain-containing protein kinase [Arabidopsis thaliana] gb|ABE65860.1| protein kinase family protein [Arabidopsis thaliana] gb|AEC07567.1| adenine nucleotide alpha hydrolase domain-containing protein kinase [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 0.0
Putative C-terminus
sp_v2.0_unigene35248 SustainPine v2.0 1030
AutoFact: Peptidyl-prolyl isomerase n=1 Tax=Zea mays RepID=B6TI78_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 70 kda peptidyl-prolyl isomerase 0.0
N-terminus
sp_v2.0_unigene35483 SustainPine v2.0 867
AutoFact: E3 ubiquitin-protein ligase CHIP [Arabidopsis thaliana] sp|Q9SRS9.1|CHIP_ARATH RecName: Full=E3 ubiquitin-protein ligase CHIP; AltName: Full=Carboxyl terminus of HSC70-interacting protein; Short=AtCHIP; AltName: Full=Plant U-box protein 61; AltName: Full= 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase chip-like 2.7367e-15
C-terminus
sp_v2.0_unigene35689 SustainPine v2.0 1047
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] emb|CAB62650.1| MS5-like protein [Arabidopsis thaliana] gb|AAP21246.1| At3g51280 [Arabidopsis thaliana] dbj|BAE99956.1| MS5 like protein [Arabidopsis thaliana] gb|AEE78773.1| tetrat 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene35875 SustainPine v2.0 735
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: tetratricopeptide repeat protein 7b-like 0.0
N-terminus
sp_v2.0_unigene35960 SustainPine v2.0 591
AutoFact: tetratricopeptide repeat-containing protein [Arabidopsis thaliana] dbj|BAB10514.1| unnamed protein product [Arabidopsis thaliana] gb|AED92407.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Peroxisome biogenesis protein 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: tetratricopeptide repeat-containing protein 0.0
Putative C-terminus
sp_v2.0_unigene36010 SustainPine v2.0 489
AutoFact: [R] COG0457 FOG: TPR repeat 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tetratricopeptide repeat-containing protein 0.0
C-terminus
sp_v2.0_unigene36067 SustainPine v2.0 567
AutoFact: DNA photolyase, putative n=1 Tax=Ricinus communis RepID=B9SPQ6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cryptochrome dash 0.0
Internal
sp_v2.0_unigene36110 SustainPine v2.0 490
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tpr repeat 0.0
C-terminus
sp_v2.0_unigene36175 SustainPine v2.0 1074
AutoFact: O-linked n-acetylglucosamine transferase, ogt, putative n=1 Tax=Ricinus communis RepID=B9SS47_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: o-linked n-acetylglucosamine 0.0
N-terminus
sp_v2.0_unigene36335 SustainPine v2.0 695
AutoFact: Gamma-soluble NSF attachment protein [Arabidopsis thaliana] sp|Q9SPE5.1|SNAG_ARATH RecName: Full=Gamma-soluble NSF attachment protein; Short=Gamma-SNAP; AltName: Full=N-ethylmaleimide-sensitive factor attachment protein gamma gb|AAF01285.1|AF177990_1 gamm 4.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gamma-soluble nsf attachment protein 1.4013e-41
C-terminus
sp_v2.0_unigene36709 SustainPine v2.0 787
AutoFact: Heat shock protein DnaJ with tetratricopeptide repeat [Arabidopsis thaliana] gb|AAO42881.1| At4g02100 [Arabidopsis thaliana] dbj|BAE99548.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82124.1| Heat shock protein DnaJ with tetratricopeptide repeat [ 2.0e-37
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: dnaj heat shock n-terminal domain-containing protein 0.0
Putative N-terminus
sp_v2.0_unigene36869 SustainPine v2.0 498
AutoFact: Kinesin light chain, putative n=1 Tax=Ricinus communis RepID=B9RB32_RICCO 4.99983e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kinesin light 0.0
Internal
sp_v2.0_unigene36984 SustainPine v2.0 573
AutoFact: [L] COG0415 Deoxyribodipyrimidine photolyase 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cryptochrome dash 0.0
Internal
sp_v2.0_unigene37053 SustainPine v2.0 417
AutoFact: Plant RNA cleavage stimulation factor, putative n=1 Tax=Ricinus communis RepID=B9S078_RICCO 7.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cleavage stimulation factor subunit 3 0.0
N-terminus
sp_v2.0_unigene37162 SustainPine v2.0 389
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: heat shock protein 70 -interacting 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain