Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, RanBP2-type

Term: IPR001876  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene33259 SustainPine v2.0 653
AutoFact: DNA topoisomerase n=1 Tax=Ricinus communis RepID=B9RRL8_RICCO 0.0
FL-Next: sp=DNA topoisomerase; Vitis vinifera (Grape). 0.0
Blast2go: dna topoisomerase iii beta 0.0
Internal
sp_v2.0_unigene33309 SustainPine v2.0 775
AutoFact: Unassigned protein
FL-Next: sp=Zinc finger protein VAR3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna polymerase zeta catalytic 5.70595e-41
Internal
sp_v2.0_unigene33864 SustainPine v2.0 489
AutoFact: D6 protein kinase like 1 n=3 Tax=Arabidopsis RepID=Q9SUA3_ARATH 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase 9.69253e-30
Internal
sp_v2.0_unigene35953 SustainPine v2.0 792
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9RF68_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna polymerase zeta catalytic 0.0
Putative C-terminus
sp_v2.0_unigene36429 SustainPine v2.0 416
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: unnamed protein product [Vitis vinifera] 1.98271e-15
N-terminus
sp_v2.0_unigene36946 SustainPine v2.0 539
AutoFact: putative translation elongation factor 2EF1A / eIF-2-gamma [Arabidopsis thaliana] dbj|BAH19422.1| AT5G10630 [Arabidopsis thaliana] gb|AED91574.1| putative translation elongation factor 2EF1A / eIF-2-gamma [Arabidopsis thaliana] 1.0e-30
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: elongation factor 1-alpha 1.24836e-34
C-terminus
sp_v2.0_unigene38099 SustainPine v2.0 452
AutoFact: flowering promoting factor-like 1 [Nicotiana tabacum] 7.0e-31
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene38119 SustainPine v2.0 394
AutoFact: PREDICTED: similar to putative serine/threonine protein kinase n=1 Tax=Vitis vinifera RepID=UPI00019841C9 5.99994e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase pinoid 2-like 0.0
Internal
sp_v2.0_unigene38570 SustainPine v2.0 361
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9RF68_RICCO 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna polymerase zeta catalytic 2.37395e-38
Internal
sp_v2.0_unigene38622 SustainPine v2.0 426
AutoFact: Zinc finger CCCH domain-containing protein 42 n=1 Tax=Arabidopsis thaliana RepID=C3H42_ARATH 2.0e-27
FL-Next: sp=Zinc finger CCCH domain-containing protein 42; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna-binding motif x-linked 2 2.28131e-34
N-terminus
sp_v2.0_unigene39997 SustainPine v2.0 308
AutoFact: Zn-finger in Ran binding domain-containing protein [Arabidopsis thaliana] gb|AAG51125.1|AC069144_22 hypothetical protein [Arabidopsis thaliana] gb|AEE33177.1| Zn-finger in Ran binding domain-containing protein [Arabidopsis thaliana] 3.0e-18
FL-Next: sp=Zinc finger protein VAR3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: zinc finger protein chloroplastic-like 4.14011e-18
Internal
sp_v2.0_unigene42667 SustainPine v2.0 605
AutoFact: histone deacetylase 15 [Arabidopsis thaliana] gb|AEE76111.1| histone deacetylase 15 [Arabidopsis thaliana] 6.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 1.16482e-32
Internal
sp_v2.0_unigene43017 SustainPine v2.0 323
AutoFact: Histone deacetylase hda1, putative n=1 Tax=Ricinus communis RepID=B9RE34_RICCO 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 7.25617e-39
Internal
sp_v2.0_unigene43393 SustainPine v2.0 893
AutoFact: protein kinase domain-containing protein [Arabidopsis thaliana] gb|AAD30630.1|AC006085_3 Similar to protein kinases [Arabidopsis thaliana] gb|AAG50535.1|AC079828_6 serine/threonine protein kinase, putative [Arabidopsis thaliana] dbj|BAF01247.1| putative s 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase oxi1-like 9.30664e-27
Internal
sp_v2.0_unigene44385 SustainPine v2.0 385
AutoFact: putative translation elongation factor 2EF1A / eIF-2-gamma [Arabidopsis thaliana] dbj|BAH19422.1| AT5G10630 [Arabidopsis thaliana] gb|AED91574.1| putative translation elongation factor 2EF1A / eIF-2-gamma [Arabidopsis thaliana] 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: translation elongation factor 2ef1a eif-2-gamma 9.97156e-23
Putative C-terminus
sp_v2.0_unigene45321 SustainPine v2.0 359
AutoFact: histone deacetylase, putative [Arabidopsis thaliana] 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 0.0
Internal
sp_v2.0_unigene45617 SustainPine v2.0 357
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: agc (camp- cgmp-dependent and protein kinase c) kinase family protein 1.99426e-30
Internal
sp_v2.0_unigene48086 SustainPine v2.0 293
AutoFact: Protein kinase PINOID n=3 Tax=Brassicaceae RepID=O64682_ARATH 5.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine protein 2.07252e-42
Internal
sp_v2.0_unigene50074 SustainPine v2.0 345
AutoFact: nudix hydrolase 19 [Arabidopsis thaliana] sp|Q94A82.1|NUD19_ARATH RecName: Full=Nudix hydrolase 19, chloroplastic; Short=AtNUDT19; AltName: Full=NADH pyrophosphatase NUDT19; Flags: Precursor gb|AAK83622.1| AT5g20070/F28I16_220 [Arabidopsis thaliana] gb|AA 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nudix hydrolase chloroplastic-like 1.99281e-39
C-terminus
sp_v2.0_unigene50233 SustainPine v2.0 277
AutoFact: splicing factor 1 [Arabidopsis thaliana] ref|NP_851169.1| splicing factor 1 [Arabidopsis thaliana] ref|NP_001032055.1| splicing factor 1 [Arabidopsis thaliana] dbj|BAA97393.1| unnamed protein product [Arabidopsis thaliana] gb|AAN13087.1| unknown protein [ 9.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: splicing factor 1 8.24187e-39
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain