Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, RanBP2-type

Term: IPR001876  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene9771 SustainPine v2.0 383
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 7.73652e-17
C-terminus
sp_v2.0_unigene10714 SustainPine v2.0 915
AutoFact: splicing factor 1 [Arabidopsis thaliana] ref|NP_851169.1| splicing factor 1 [Arabidopsis thaliana] ref|NP_001032055.1| splicing factor 1 [Arabidopsis thaliana] dbj|BAA97393.1| unnamed protein product [Arabidopsis thaliana] gb|AAN13087.1| unknown protein [ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: splicing factor 1 0.0
Internal
sp_v2.0_unigene12586 SustainPine v2.0 1971
AutoFact: RING Zn-finger domain-containing protein n=1 Tax=Arabidopsis thaliana RepID=F4IK69_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
sp_v2.0_unigene12671 SustainPine v2.0 1747
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SWQ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase 0.0
C-terminus
sp_v2.0_unigene13228 SustainPine v2.0 525
AutoFact: Histone deacetylase RPD3/HDA1 class II n=3 Tax=Triticeae RepID=C1IC96_HORVU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 15-like 0.0
Internal
sp_v2.0_unigene13757 SustainPine v2.0 1101
AutoFact: RNA-binding protein-like [Oryza sativa Japonica Group] gb|EEE69405.1| hypothetical protein OsJ_28765 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding 0.0
C-terminus
sp_v2.0_unigene14044 SustainPine v2.0 649
AutoFact: Histone deacetylase hda1, putative n=1 Tax=Ricinus communis RepID=B9RE34_RICCO 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 15 0.0
Internal
sp_v2.0_unigene15094 SustainPine v2.0 1345
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 5.00264e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene16092 SustainPine v2.0 2226
AutoFact: Ran BP2/NZF zinc finger domain-containing protein [Arabidopsis thaliana] sp|Q8GZ43.1|YZR3_ARATH RecName: Full=RanBP2-type zinc finger protein At1g67325 dbj|BAC41896.1| unknown protein [Arabidopsis thaliana] gb|AAO63346.1| At1g67325 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: p53 binding 0.0
Complete
sp_v2.0_unigene16551 SustainPine v2.0 1555
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 4.0e-27
FL-Next: tr=Putative histone H1; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h1 3.06217e-31
Complete
sp_v2.0_unigene17523 SustainPine v2.0 507
AutoFact: 60S ribosomal protein L24, putative n=2 Tax=fabids RepID=B9SRL5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene19214 SustainPine v2.0 697
AutoFact: zf-RanBP domain containing protein 0.0001
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.65587e-29
C-terminus
sp_v2.0_unigene20401 SustainPine v2.0 412
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9RF68_RICCO 3.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna polymerase zeta catalytic 3.9962e-26
C-terminus
sp_v2.0_unigene22085 SustainPine v2.0 440
AutoFact: Protein FAM96B, putative n=1 Tax=Ricinus communis RepID=B9SBL1_RICCO 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mip18 family protein at1g68310-like 7.42688e-44
C-terminus
sp_v2.0_unigene25478 SustainPine v2.0 1807
AutoFact: putative U1 snRNP 70K protein [Trifolium pratense] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: u1 small nuclear ribonucleoprotein 70 kda-like 0.0
Complete
sp_v2.0_unigene26082 SustainPine v2.0 572
AutoFact: putative zinc-finger protein [Oryza sativa Japonica Group] 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc-finger protein 0.0
N-terminus
sp_v2.0_unigene26305 SustainPine v2.0 952
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SWQ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine protein 0.0
Internal
sp_v2.0_unigene27354 SustainPine v2.0 789
AutoFact: Gly_rich multi-domain protein 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: zinc finger protein 0.0
Complete
sp_v2.0_unigene28564 SustainPine v2.0 861
AutoFact: Histone deacetylase RPD3/HDA1 class II n=3 Tax=Triticeae RepID=C1IC96_HORVU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 15-like 0.0
C-terminus
sp_v2.0_unigene29670 SustainPine v2.0 720
AutoFact: PRP38_assoc multi-domain protein 6.0e-12
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain