Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Pseudouridine synthase I, TruA

Term: IPR001406  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene5598 SustainPine v2.0 1959
• AutoFact: tRNA pseudouridine synthase family protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCD2_CUCME 0.0
• FL-Next: sp=Putative tRNA pseudouridine synthase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: trna pseudouridine synthase 0.0
C-terminus
sp_v2.0_unigene6560 SustainPine v2.0 2118
• AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: yth domain family protein 0.0
Putative C-terminus
sp_v2.0_unigene7532 SustainPine v2.0 592
• AutoFact: Pseudouridine synthase (Fragment) n=1 Tax=Vitis vinifera RepID=D7SJM4_VITVI 3.0e-31
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
• Blast2go: trna pseudouridine synthase-like 9.1229e-37
Complete
sp_v2.0_unigene7663 SustainPine v2.0 1554
• AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AA47_PICSI 0.0
• FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: trna pseudouridine synthase a-like 0.0
Putative Complete
sp_v2.0_unigene13506 SustainPine v2.0 992
• AutoFact: Pseudouridine synthase n=4 Tax=Arabidopsis RepID=A1A6J3_ARATH 0.0
• FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: trna pseudouridine synthase family protein 0.0
Putative N-terminus
sp_v2.0_unigene13571 SustainPine v2.0 1293
• AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AE97_PICSI 0.0
• FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: trna pseudouridine synthase a 0.0
Complete
sp_v2.0_unigene16390 SustainPine v2.0 2783
• AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: yth domain family protein 0.0
Complete
sp_v2.0_unigene19927 SustainPine v2.0 1307
• AutoFact: pfam04146, YTH, YT521-B-like domain 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: yth domain family protein 0.0
C-terminus
sp_v2.0_unigene25910 SustainPine v2.0 294
• AutoFact: Pseudouridine synthase n=1 Tax=Ricinus communis RepID=B9RVG5_RICCO 5.0e-19
• FL-Next: sp=Putative tRNA pseudouridine synthase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: trna pseudouridine synthase-like 9.74504e-23
Internal
sp_v2.0_unigene28454 SustainPine v2.0 715
• AutoFact: Pseudouridine synthase (Fragment) n=1 Tax=Vitis vinifera RepID=E0CQU3_VITVI 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: trna pseudouridine synthase 2.73189e-38
C-terminus
sp_v2.0_unigene31919 SustainPine v2.0 412
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RF24_RICCO 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger family protein 1.4135e-37
Internal
sp_v2.0_unigene33956 SustainPine v2.0 403
• AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AA47_PICSI 0.0
• FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: trna pseudouridine synthase a-like 0.0
Internal
sp_v2.0_unigene37640 SustainPine v2.0 526
• AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=A9P2G1_PICSI 0.0
• FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: trna pseudouridine synthase-like 0.0
Putative N-terminus
sp_v2.0_unigene38906 SustainPine v2.0 366
• AutoFact: Pseudouridine synthase (Fragment) n=2 Tax=Selaginella moellendorffii RepID=D8SNZ9_SELML 0.0
• FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: trna pseudouridine synthase family protein 0.0
Putative C-terminus
sp_v2.0_unigene42722 SustainPine v2.0 330
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9SNU8_RICCO 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 9.36883e-33
Internal
sp_v2.0_unigene46102 SustainPine v2.0 684
• AutoFact: Pseudouridine synthase n=1 Tax=Ricinus communis RepID=B9SM90_RICCO 0.0
• FL-Next: sp=Pseudouridine synthase; Ricinus communis (Castor bean). 0.0
• Blast2go: trna pseudouridine synthase 3-like 0.0
Internal
sp_v2.0_unigene59853 SustainPine v2.0 472
• AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=A9P2G1_PICSI 7.0e-34
• FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 3.51726e-42
N-terminus
sp_v2.0_unigene64499 SustainPine v2.0 626
• AutoFact: Pseudouridine synthase (Fragment) n=1 Tax=Populus trichocarpa RepID=B9I6V0_POPTR 0.0
• FL-Next: sp=Putative tRNA pseudouridine synthase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: trna pseudouridine synthase-like 0.0
Internal
sp_v2.0_unigene66287 SustainPine v2.0 397
• AutoFact: pfam04146, YTH, YT521-B-like domain 3.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 4.24593e-43
Internal
sp_v2.0_unigene66401 SustainPine v2.0 443
• AutoFact: RING/c3HC4/PHD zinc finger-like protein [Cucumis melo subsp. melo] 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain