Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: TRAF-type

Term: IPR013322  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene527 SustainPine v2.0 869
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein skip5 0.0
C-terminus
sp_v2.0_unigene2048 SustainPine v2.0 2939
AutoFact: Myosin_tail_1 multi-domain protein 3.0e-06
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: cgs1 mrna stability 0.0
C-terminus
sp_v2.0_unigene3528 SustainPine v2.0 1880
AutoFact: ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana] gb|AAK25908.1|AF360198_1 putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AAN13185.1| putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AED91040.1| ubiq 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 12 0.0
Complete
sp_v2.0_unigene5554 SustainPine v2.0 1783
AutoFact: ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana] gb|AAK25908.1|AF360198_1 putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AAN13185.1| putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AED91040.1| ubiq 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 12-like 0.0
Putative Complete
sp_v2.0_unigene6917 SustainPine v2.0 2175
AutoFact: putative ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana] 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 12-like 0.0
C-terminus
sp_v2.0_unigene7326 SustainPine v2.0 613
AutoFact: ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana] 1.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 12 6.01577e-42
N-terminus
sp_v2.0_unigene7418 SustainPine v2.0 1909
AutoFact: BTB/POZ and M2 domain-containing protein [Arabidopsis thaliana] sp|Q9M8J9.1|BPM2_ARATH RecName: Full=BTB/POZ and MATH domain-containing protein 2; AltName: Full=Protein BTB-POZ AND MATH DOMAIN 2; Short=AtBPM2 gb|AAF30312.1|AC018907_12 unknown protein [Ara 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: btb poz and math domain-containing protein 2-like 0.0
Complete
sp_v2.0_unigene8410 SustainPine v2.0 524
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: speckle-type poz protein 4.77358e-40
N-terminus
sp_v2.0_unigene8587 SustainPine v2.0 2426
AutoFact: ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana] 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 12-like 0.0
C-terminus
sp_v2.0_unigene9223 SustainPine v2.0 1086
AutoFact: Ubiquitin specific protease 12 n=2 Tax=Glycine max RepID=D3G9L7_SOYBN 8.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin specific protease 12 4.27147e-40
Putative Complete
sp_v2.0_unigene9411 SustainPine v2.0 1692
AutoFact: pfam03145, Sina, Seven in absentia protein family 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin ligase 0.0
Complete
sp_v2.0_unigene9453 SustainPine v2.0 2329
AutoFact: BTB/POZ; MATH [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: speckle-type poz protein 0.0
Complete
sp_v2.0_unigene10133 SustainPine v2.0 2037
AutoFact: BTB/POZ and M4 domain-containing protein [Arabidopsis thaliana] sp|Q9SRV1.1|BPM4_ARATH RecName: Full=BTB/POZ and MATH domain-containing protein 4; AltName: Full=Protein BTB-POZ AND MATH DOMAIN 4; Short=AtBPM4 gb|AAF00643.1|AC009540_20 unknown protein [Ara 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: speckle-type poz protein 0.0
Complete
sp_v2.0_unigene10655 SustainPine v2.0 593
AutoFact: F-box protein SKIP5 [Arabidopsis thaliana] sp|Q94FT2.1|SKIP5_ARATH RecName: Full=F-box protein SKIP5; AltName: Full=SKP1-interacting partner 5 gb|AAK61345.1|AF347972_1 SKP1-interacting partner 5 [Arabidopsis thaliana] gb|AAM61599.1| SKP1 interacting partn 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein skip5 0.0
Internal
sp_v2.0_unigene15544 SustainPine v2.0 1885
AutoFact: PREDICTED: SINA2p isoform 2 [Vitis vinifera] ref|XP_002280243.1| PREDICTED: SINA2p isoform 1 [Vitis vinifera] emb|CAB40578.1| SINA2p [Vitis vinifera] emb|CBI29998.3| unnamed protein product [Vitis vinifera] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase sinat2 0.0
Complete
sp_v2.0_unigene17557 SustainPine v2.0 4371
AutoFact: CM0545.290.nc protein n=1 Tax=Lotus japonicus RepID=B0BLB2_LOTJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v2.0_unigene19797 SustainPine v2.0 1831
AutoFact: pfam03145, Sina, Seven in absentia protein family 0.0
FL-Next: sp=E3 ubiquitin-protein ligase SINAT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin ligase 0.0
Complete
sp_v2.0_unigene21690 SustainPine v2.0 1365
AutoFact: seven in absentia-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin ligase sinat3 0.0
C-terminus
sp_v2.0_unigene22576 SustainPine v2.0 2024
AutoFact: BTB-POZ and math domain-containing protein [Arabidopsis thaliana] sp|Q8L765.1|BPM1_ARATH RecName: Full=BTB/POZ and MATH domain-containing protein 1; AltName: Full=Protein BTB-POZ AND MATH DOMAIN 1; Short=AtBPM1 gb|AAM97116.1| putative protein [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene25397 SustainPine v2.0 724
AutoFact: pfam03145, Sina, Seven in absentia protein family 7.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin ligase 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain