Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: TRAF-type

Term: IPR013322  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene68944 SustainPine v2.0 385
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 8.47814e-15
N-terminus
sp_v2.0_unigene70709 SustainPine v2.0 337
AutoFact: putative ubiquitin-specific protease [Oryza sativa Japonica Group] 6.0e-38
FL-Next: Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana GN=UBP12 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 12 4.76441e-44
Internal
sp_v2.0_unigene72219 SustainPine v2.0 376
AutoFact: zinc finger POZ domain protein [Oryza sativa Japonica Group] 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: speckle-type poz 9.87888e-22
Internal
sp_v2.0_unigene72245 SustainPine v2.0 243
AutoFact: putative ubiquitin-specific protease [Oryza sativa Japonica Group] 2.0e-15
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 12-like 4.64894e-20
Internal
sp_v2.0_unigene73704 SustainPine v2.0 337
AutoFact: SINA [Phyllostachys praecox] 9.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase sinat5-like 7.05997e-35
C-terminus
sp_v2.0_unigene76860 SustainPine v2.0 644
AutoFact: putative ubiquitin protease [Oryza sativa Indica Group] 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase family protein 0.0
Internal
sp_v2.0_unigene77117 SustainPine v2.0 251
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v2.0_unigene78270 SustainPine v2.0 503
AutoFact: zinc finger POZ domain protein [Oryza sativa Japonica Group] 7.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: btb poz and math domain-containing protein 4-like 0.0
C-terminus
sp_v2.0_unigene78865 SustainPine v2.0 446
AutoFact: ubiquitin ligase SINAT5-related (seven in absentia protein family) [Musa balbisiana] 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin ligase 7.41186e-29
C-terminus
sp_v2.0_unigene80090 SustainPine v2.0 1166
AutoFact: aldehyde dehydrogenase [Vitis pseudoreticulata] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aldehyde dehydrogenase family 2 member mitochondrial-like 0.0
N-terminus
sp_v2.0_unigene85287 SustainPine v2.0 632
AutoFact: pfam03145, Sina, Seven in absentia protein family 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin ligase 0.0
N-terminus
sp_v2.0_unigene85976 SustainPine v2.0 416
AutoFact: ubiquitin ligase SINAT5-related (seven in absentia protein family) [Musa balbisiana] 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.24208e-44
C-terminus
sp_v2.0_unigene88165 SustainPine v2.0 948
AutoFact: CM0545.290.nc protein n=1 Tax=Lotus japonicus RepID=B0BLB2_LOTJA 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase family protein 0.0
Internal
sp_v2.0_unigene89497 SustainPine v2.0 284
AutoFact: SINA [Phyllostachys praecox] 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin ligase 1.38583e-38
Internal
sp_v2.0_unigene92468 SustainPine v2.0 1740
AutoFact: PREDICTED: SINA2p isoform 2 [Vitis vinifera] ref|XP_002280243.1| PREDICTED: SINA2p isoform 1 [Vitis vinifera] emb|CAB40578.1| SINA2p [Vitis vinifera] emb|CBI29998.3| unnamed protein product [Vitis vinifera] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase sinat2 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain